Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPA3P35244 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
RPA3P35244 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.61■□□□□ 0.73
RPA3P35244 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 KRT8P20-201ENST00000423953 1409 ntBASIC19.61■□□□□ 0.73
RPA3P35244 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.61■□□□□ 0.73
RPA3P35244 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.61■□□□□ 0.73
RPA3P35244 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.61■□□□□ 0.73
RPA3P35244 AL355802.2-201ENST00000402069 882 ntBASIC19.61■□□□□ 0.73
RPA3P35244 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RPA3P35244 AC092118.2-201ENST00000613495 667 ntBASIC19.61■□□□□ 0.73
RPA3P35244 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.61■□□□□ 0.73
RPA3P35244 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPA3P35244 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.61■□□□□ 0.73
RPA3P35244 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.61■□□□□ 0.73
RPA3P35244 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPA3P35244 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.6■□□□□ 0.73
RPA3P35244 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RPA3P35244 AL161938.1-201ENST00000569833 2180 ntBASIC19.6■□□□□ 0.73
RPA3P35244 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.6■□□□□ 0.73
RPA3P35244 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.6■□□□□ 0.73
RPA3P35244 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.6■□□□□ 0.73
RPA3P35244 AL138781.1-201ENST00000566567 1274 ntBASIC19.6■□□□□ 0.73
RPA3P35244 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RPA3P35244 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.6■□□□□ 0.73
RPA3P35244 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPA3P35244 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RPA3P35244 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RPA3P35244 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RPA3P35244 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RPA3P35244 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.59■□□□□ 0.73
RPA3P35244 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RPA3P35244 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RPA3P35244 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.59■□□□□ 0.73
RPA3P35244 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.59■□□□□ 0.73
RPA3P35244 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.59■□□□□ 0.73
RPA3P35244 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.59■□□□□ 0.73
RPA3P35244 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.59■□□□□ 0.73
RPA3P35244 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RPA3P35244 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.59■□□□□ 0.73
RPA3P35244 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.59■□□□□ 0.73
RPA3P35244 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RPA3P35244 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
RPA3P35244 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPA3P35244 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RPA3P35244 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPA3P35244 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.58■□□□□ 0.73
RPA3P35244 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.58■□□□□ 0.73
RPA3P35244 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPA3P35244 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.58■□□□□ 0.73
RPA3P35244 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPA3P35244 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.58■□□□□ 0.73
RPA3P35244 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.58■□□□□ 0.73
RPA3P35244 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPA3P35244 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
RPA3P35244 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.58■□□□□ 0.73
RPA3P35244 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPA3P35244 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RPA3P35244 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms