Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.86■□□□□ 0.93
CD58P19256 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.86■□□□□ 0.93
CD58P19256 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 KRT16P5-201ENST00000455284 522 ntBASIC20.86■□□□□ 0.93
CD58P19256 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.86■□□□□ 0.93
CD58P19256 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.86■□□□□ 0.93
CD58P19256 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.86■□□□□ 0.93
CD58P19256 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
CD58P19256 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
CD58P19256 KRT8P8-201ENST00000434750 1448 ntBASIC20.86■□□□□ 0.93
CD58P19256 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD58P19256 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.86■□□□□ 0.93
CD58P19256 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.85■□□□□ 0.93
CD58P19256 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CD58P19256 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.85■□□□□ 0.93
CD58P19256 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CD58P19256 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CD58P19256 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.85■□□□□ 0.93
CD58P19256 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.85■□□□□ 0.93
CD58P19256 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.85■□□□□ 0.93
CD58P19256 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
CD58P19256 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.85■□□□□ 0.93
CD58P19256 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD58P19256 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CD58P19256 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD58P19256 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD58P19256 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.84■□□□□ 0.93
CD58P19256 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CD58P19256 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.84■□□□□ 0.93
CD58P19256 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD58P19256 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.84■□□□□ 0.93
CD58P19256 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.84■□□□□ 0.93
CD58P19256 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD58P19256 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD58P19256 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.84■□□□□ 0.93
CD58P19256 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CD58P19256 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD58P19256 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD58P19256 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.84■□□□□ 0.93
CD58P19256 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD58P19256 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CD58P19256 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.83■□□□□ 0.93
CD58P19256 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CD58P19256 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.83■□□□□ 0.93
CD58P19256 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD58P19256 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.83■□□□□ 0.93
CD58P19256 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.83■□□□□ 0.93
CD58P19256 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD58P19256 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
CD58P19256 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
CD58P19256 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD58P19256 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CD58P19256 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.82■□□□□ 0.92
CD58P19256 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD58P19256 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.82■□□□□ 0.92
CD58P19256 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD58P19256 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD58P19256 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD58P19256 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD58P19256 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms