Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ATF7P17544 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATF7P17544 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATF7P17544 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ATF7P17544 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.32■■□□□ 1
ATF7P17544 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ATF7P17544 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATF7P17544 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.32■■□□□ 1
ATF7P17544 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.32■■□□□ 1
ATF7P17544 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATF7P17544 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 AL512408.1-201ENST00000569378 2000 ntBASIC21.31■■□□□ 1
ATF7P17544 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.31■■□□□ 1
ATF7P17544 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.31■■□□□ 1
ATF7P17544 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 TUBB8P6-201ENST00000436895 1288 ntBASIC21.31■■□□□ 1
ATF7P17544 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.31■■□□□ 1
ATF7P17544 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.31■■□□□ 1
ATF7P17544 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.31■■□□□ 1
ATF7P17544 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.31■■□□□ 1
ATF7P17544 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.31■■□□□ 1
ATF7P17544 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATF7P17544 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.3■■□□□ 1
ATF7P17544 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.3■■□□□ 1
ATF7P17544 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.3■■□□□ 1
ATF7P17544 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.3■■□□□ 1
ATF7P17544 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.3■■□□□ 1
ATF7P17544 B3GAT3P1-201ENST00000471720 806 ntBASIC21.3■■□□□ 1
ATF7P17544 AC011506.1-201ENST00000474329 610 ntBASIC21.3■■□□□ 1
ATF7P17544 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
ATF7P17544 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.3■■□□□ 1
ATF7P17544 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.3■■□□□ 1
ATF7P17544 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.3■■□□□ 1
ATF7P17544 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
ATF7P17544 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.3■■□□□ 1
ATF7P17544 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATF7P17544 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
ATF7P17544 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 AL162377.1-201ENST00000618844 1793 ntBASIC21.29■■□□□ 1
ATF7P17544 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.29■■□□□ 1
ATF7P17544 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.29■■□□□ 1
ATF7P17544 AC005363.2-201ENST00000618631 242 ntBASIC21.29■■□□□ 1
ATF7P17544 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ATF7P17544 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.29■■□□□ 1
ATF7P17544 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ATF7P17544 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATF7P17544 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATF7P17544 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATF7P17544 FSCN1P1-201ENST00000568912 1481 ntBASIC21.28■■□□□ 1
ATF7P17544 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ATF7P17544 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.28■■□□□ 1
ATF7P17544 LINC01568-207ENST00000641790 1380 ntBASIC21.28■■□□□ 1
ATF7P17544 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ATF7P17544 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.28■■□□□ 1
ATF7P17544 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ATF7P17544 NAPSB-206ENST00000562112 1266 ntBASIC21.28■■□□□ 1
ATF7P17544 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATF7P17544 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.28■■□□□ 1
ATF7P17544 AC112907.3-201ENST00000577781 2400 ntBASIC21.28■■□□□ 1
ATF7P17544 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATF7P17544 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.28■■□□□ 1
ATF7P17544 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATF7P17544 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATF7P17544 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATF7P17544 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATF7P17544 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ATF7P17544 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.27■■□□□ 1
ATF7P17544 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.27■■□□□ 1
ATF7P17544 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.27■■□□□ 1
ATF7P17544 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATF7P17544 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.27■■□□□ 1
ATF7P17544 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.27■■□□□ 1
ATF7P17544 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATF7P17544 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms