Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NCK1P16333 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.34■□□□□ 0.53
NCK1P16333 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NCK1P16333 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.34■□□□□ 0.53
NCK1P16333 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.34■□□□□ 0.53
NCK1P16333 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.34■□□□□ 0.53
NCK1P16333 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.34■□□□□ 0.53
NCK1P16333 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NCK1P16333 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.34■□□□□ 0.53
NCK1P16333 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.34■□□□□ 0.53
NCK1P16333 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCK1P16333 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCK1P16333 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCK1P16333 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCK1P16333 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.33■□□□□ 0.53
NCK1P16333 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCK1P16333 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.33■□□□□ 0.53
NCK1P16333 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCK1P16333 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCK1P16333 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.33■□□□□ 0.53
NCK1P16333 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCK1P16333 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 AL355472.2-201ENST00000422958 438 ntBASIC18.33■□□□□ 0.52
NCK1P16333 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.33■□□□□ 0.52
NCK1P16333 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.33■□□□□ 0.52
NCK1P16333 AC100791.3-201ENST00000617619 330 ntBASIC18.33■□□□□ 0.52
NCK1P16333 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.33■□□□□ 0.52
NCK1P16333 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
NCK1P16333 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.33■□□□□ 0.52
NCK1P16333 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.33■□□□□ 0.52
NCK1P16333 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NCK1P16333 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.33■□□□□ 0.52
NCK1P16333 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.33■□□□□ 0.52
NCK1P16333 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.33■□□□□ 0.52
NCK1P16333 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.33■□□□□ 0.52
NCK1P16333 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCK1P16333 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.32■□□□□ 0.52
NCK1P16333 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.32■□□□□ 0.52
NCK1P16333 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
NCK1P16333 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.32■□□□□ 0.52
NCK1P16333 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NCK1P16333 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NCK1P16333 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCK1P16333 WIZP1-201ENST00000531444 2299 ntBASIC18.32■□□□□ 0.52
NCK1P16333 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
NCK1P16333 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NCK1P16333 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.31■□□□□ 0.52
NCK1P16333 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCK1P16333 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms