Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL4P13236 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL4P13236 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL4P13236 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL4P13236 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CCL4P13236 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL4P13236 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCL4P13236 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CCL4P13236 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL4P13236 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL4P13236 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.36■□□□□ 0.53
CCL4P13236 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL4P13236 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL4P13236 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL4P13236 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL4P13236 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL4P13236 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL4P13236 CKBP1-201ENST00000565489 1086 ntBASIC18.36■□□□□ 0.53
CCL4P13236 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.36■□□□□ 0.53
CCL4P13236 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.36■□□□□ 0.53
CCL4P13236 AC091076.1-201ENST00000610741 619 ntBASIC18.36■□□□□ 0.53
CCL4P13236 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
CCL4P13236 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL4P13236 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL4P13236 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCL4P13236 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCL4P13236 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL4P13236 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL4P13236 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL4P13236 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCL4P13236 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.35■□□□□ 0.53
CCL4P13236 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.35■□□□□ 0.53
CCL4P13236 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.35■□□□□ 0.53
CCL4P13236 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.35■□□□□ 0.53
CCL4P13236 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.35■□□□□ 0.53
CCL4P13236 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CCL4P13236 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL4P13236 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL4P13236 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL4P13236 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCL4P13236 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.34■□□□□ 0.53
CCL4P13236 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL4P13236 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 CA15P1-201ENST00000481698 905 ntBASIC18.34■□□□□ 0.53
CCL4P13236 AP003041.3-201ENST00000527151 707 ntBASIC18.34■□□□□ 0.53
CCL4P13236 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL4P13236 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.34■□□□□ 0.53
CCL4P13236 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL4P13236 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL4P13236 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.33■□□□□ 0.53
CCL4P13236 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.33■□□□□ 0.53
CCL4P13236 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL4P13236 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.33■□□□□ 0.53
CCL4P13236 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL4P13236 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.33■□□□□ 0.53
CCL4P13236 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL4P13236 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCL4P13236 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL4P13236 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCL4P13236 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.33■□□□□ 0.52
CCL4P13236 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.33■□□□□ 0.52
CCL4P13236 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCL4P13236 AL023973.1-201ENST00000624619 620 ntBASIC18.33■□□□□ 0.52
CCL4P13236 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCL4P13236 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.33■□□□□ 0.52
CCL4P13236 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCL4P13236 AP005212.1-201ENST00000581547 1997 ntBASIC18.33■□□□□ 0.52
CCL4P13236 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL4P13236 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL4P13236 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL4P13236 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL4P13236 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CCL4P13236 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL4P13236 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL4P13236 AC140113.3-201ENST00000605663 199 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms