Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 GABARAPL3-202ENST00000624044 1851 ntBASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 KRT8P8-201ENST00000434750 1448 ntBASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 TSPY14P-201ENST00000303979 915 ntBASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 AL137013.1-201ENST00000432946 1228 ntBASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 SLC25A3P1-201ENST00000443844 931 ntBASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40ALP0C0E4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 RCC2P6-201ENST00000526625 1557 ntBASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 AC004951.3-201ENST00000418645 1148 ntBASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40ALP0C0E4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 TERF1P1-201ENST00000311003 1181 ntBASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 CRYGFP-201ENST00000418459 633 ntBASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 AC128688.1-201ENST00000487626 519 ntBASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 AC011298.2-201ENST00000617989 482 ntBASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 AL590326.2-201ENST00000625139 305 ntBASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40ALP0C0E4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 AC020907.5-201ENST00000624372 1936 ntBASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 AL049597.2-201ENST00000565575 961 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms