Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSN3P07498 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSN3P07498 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSN3P07498 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CSN3P07498 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.26■□□□□ 0.03
CSN3P07498 AC006058.3-201ENST00000606217 1069 ntBASIC15.26■□□□□ 0.03
CSN3P07498 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.26■□□□□ 0.03
CSN3P07498 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CSN3P07498 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSN3P07498 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.26■□□□□ 0.03
CSN3P07498 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSN3P07498 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CSN3P07498 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSN3P07498 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.26■□□□□ 0.03
CSN3P07498 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSN3P07498 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSN3P07498 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.25■□□□□ 0.03
CSN3P07498 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.25■□□□□ 0.03
CSN3P07498 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSN3P07498 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.25■□□□□ 0.03
CSN3P07498 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.25■□□□□ 0.03
CSN3P07498 KRT18P29-201ENST00000397031 1267 ntBASIC15.25■□□□□ 0.03
CSN3P07498 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSN3P07498 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSN3P07498 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.25■□□□□ 0.03
CSN3P07498 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.25■□□□□ 0.03
CSN3P07498 AC008687.6-201ENST00000596318 630 ntBASIC15.25■□□□□ 0.03
CSN3P07498 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.25■□□□□ 0.03
CSN3P07498 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.25■□□□□ 0.03
CSN3P07498 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSN3P07498 AC020907.5-201ENST00000624372 1936 ntBASIC15.25■□□□□ 0.03
CSN3P07498 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSN3P07498 PTBP1P-201ENST00000554374 1601 ntBASIC15.25■□□□□ 0.03
CSN3P07498 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CSN3P07498 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.24■□□□□ 0.03
CSN3P07498 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CSN3P07498 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.24■□□□□ 0.03
CSN3P07498 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CSN3P07498 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.24■□□□□ 0.03
CSN3P07498 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.24■□□□□ 0.03
CSN3P07498 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.24■□□□□ 0.03
CSN3P07498 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.24■□□□□ 0.03
CSN3P07498 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.24■□□□□ 0.03
CSN3P07498 DPP3P2-201ENST00000416030 1696 ntBASIC15.24■□□□□ 0.03
CSN3P07498 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 AC116562.4-201ENST00000641316 2276 ntBASIC15.24■□□□□ 0.03
CSN3P07498 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.24■□□□□ 0.03
CSN3P07498 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.24■□□□□ 0.03
CSN3P07498 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CSN3P07498 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSN3P07498 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSN3P07498 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.23■□□□□ 0.03
CSN3P07498 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.23■□□□□ 0.03
CSN3P07498 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.23■□□□□ 0.03
CSN3P07498 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSN3P07498 HLA-G-202ENST00000376815 851 ntBASIC15.23■□□□□ 0.03
CSN3P07498 HLA-G-203ENST00000376818 1127 ntBASIC15.23■□□□□ 0.03
CSN3P07498 KRT17P3-201ENST00000420566 1262 ntBASIC15.23■□□□□ 0.03
CSN3P07498 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms