Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.73■□□□□ 0.75
HLA-DQB2P05538 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.73■□□□□ 0.75
HLA-DQB2P05538 AC104417.2-201ENST00000562989 1793 ntBASIC19.72■□□□□ 0.75
HLA-DQB2P05538 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB2P05538 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 LINC01465-201ENST00000408887 1940 ntBASIC19.71■□□□□ 0.75
HLA-DQB2P05538 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 FAM197Y4-202ENST00000622692 608 ntBASIC19.71■□□□□ 0.75
HLA-DQB2P05538 HLA-A-209ENST00000638375 975 ntBASIC19.71■□□□□ 0.75
HLA-DQB2P05538 AL032819.2-201ENST00000624543 2162 ntBASIC19.71■□□□□ 0.75
HLA-DQB2P05538 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB2P05538 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
HLA-DQB2P05538 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 SDHAP1-207ENST00000440850 2000 ntBASIC19.7■□□□□ 0.74
HLA-DQB2P05538 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB2P05538 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 GCSHP5-201ENST00000443090 522 ntBASIC19.69■□□□□ 0.74
HLA-DQB2P05538 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 AC142381.4-202ENST00000563973 229 ntBASIC19.69■□□□□ 0.74
HLA-DQB2P05538 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms