Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 AL050303.2-201ENST00000619798 666 ntBASIC17.45■□□□□ 0.38
HLA-DPB1P04440 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 AC007613.1-201ENST00000572811 2597 ntBASIC17.45■□□□□ 0.38
HLA-DPB1P04440 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DPB1P04440 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 BCL2-203ENST00000589955 5011 ntBASIC17.43■□□□□ 0.38
HLA-DPB1P04440 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AC006970.2-201ENST00000450065 779 ntBASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AC093787.1-201ENST00000450396 207 ntBASIC17.43■□□□□ 0.38
HLA-DPB1P04440 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AL049812.1-201ENST00000432563 2267 ntBASIC17.43■□□□□ 0.38
HLA-DPB1P04440 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 CYP21A1P-202ENST00000354927 1481 ntBASIC17.43■□□□□ 0.38
HLA-DPB1P04440 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DPB1P04440 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 KRT16P6-202ENST00000425692 1426 ntBASIC17.42■□□□□ 0.38
HLA-DPB1P04440 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms