Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
P04436 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
P04436 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.76■□□□□ 0.43
P04436 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.76■□□□□ 0.43
P04436 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.76■□□□□ 0.43
P04436 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.76■□□□□ 0.43
P04436 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 MMP23A-201ENST00000234610 1017 ntBASIC17.76■□□□□ 0.43
P04436 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
P04436 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.76■□□□□ 0.43
P04436 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.76■□□□□ 0.43
P04436 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.76■□□□□ 0.43
P04436 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.76■□□□□ 0.43
P04436 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.76■□□□□ 0.43
P04436 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04436 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.75■□□□□ 0.43
P04436 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.75■□□□□ 0.43
P04436 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 AC112907.3-201ENST00000577781 2400 ntBASIC17.75■□□□□ 0.43
P04436 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.75■□□□□ 0.43
P04436 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.75■□□□□ 0.43
P04436 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.75■□□□□ 0.43
P04436 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.75■□□□□ 0.43
P04436 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.75■□□□□ 0.43
P04436 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 AP000525.1-201ENST00000608286 694 ntBASIC17.75■□□□□ 0.43
P04436 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
P04436 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
P04436 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04436 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 AC087499.1-201ENST00000418141 1075 ntBASIC17.74■□□□□ 0.43
P04436 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.74■□□□□ 0.43
P04436 B3GAT3P1-201ENST00000471720 806 ntBASIC17.74■□□□□ 0.43
P04436 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.74■□□□□ 0.43
P04436 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.74■□□□□ 0.43
P04436 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.74■□□□□ 0.43
P04436 AL160286.2-201ENST00000567150 934 ntBASIC17.74■□□□□ 0.43
P04436 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 LINC01023-201ENST00000606054 436 ntBASIC17.74■□□□□ 0.43
P04436 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
P04436 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.74■□□□□ 0.43
P04436 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
P04436 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04436 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
P04436 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
P04436 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
P04436 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
P04436 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
P04436 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
P04436 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
P04436 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
P04436 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
P04436 MIR1238-201ENST00000408483 83 ntBASIC17.73■□□□□ 0.43
P04436 AC211429.1-201ENST00000415277 523 ntBASIC17.73■□□□□ 0.43
P04436 AC004951.3-201ENST00000418645 1148 ntBASIC17.73■□□□□ 0.43
P04436 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms