Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.14■□□□□ 0.49
PDGFAP04085 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.14■□□□□ 0.49
PDGFAP04085 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 B3GAT3P1-201ENST00000471720 806 ntBASIC18.14■□□□□ 0.49
PDGFAP04085 AC011506.1-201ENST00000474329 610 ntBASIC18.14■□□□□ 0.49
PDGFAP04085 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.14■□□□□ 0.49
PDGFAP04085 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
PDGFAP04085 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDGFAP04085 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PDGFAP04085 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
PDGFAP04085 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFAP04085 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDGFAP04085 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.13■□□□□ 0.49
PDGFAP04085 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDGFAP04085 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.13■□□□□ 0.49
PDGFAP04085 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.13■□□□□ 0.49
PDGFAP04085 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.13■□□□□ 0.49
PDGFAP04085 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.13■□□□□ 0.49
PDGFAP04085 AL445675.2-201ENST00000620291 557 ntBASIC18.13■□□□□ 0.49
PDGFAP04085 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDGFAP04085 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.13■□□□□ 0.49
PDGFAP04085 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.13■□□□□ 0.49
PDGFAP04085 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFAP04085 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.13■□□□□ 0.49
PDGFAP04085 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.12■□□□□ 0.49
PDGFAP04085 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDGFAP04085 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.12■□□□□ 0.49
PDGFAP04085 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.12■□□□□ 0.49
PDGFAP04085 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.12■□□□□ 0.49
PDGFAP04085 LIN28AP1-201ENST00000429574 405 ntBASIC18.12■□□□□ 0.49
PDGFAP04085 ATP5G1P1-201ENST00000448724 379 ntBASIC18.12■□□□□ 0.49
PDGFAP04085 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.12■□□□□ 0.49
PDGFAP04085 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.12■□□□□ 0.49
PDGFAP04085 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.12■□□□□ 0.49
PDGFAP04085 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 C2orf69P3-201ENST00000565542 1120 ntBASIC18.12■□□□□ 0.49
PDGFAP04085 AP005242.2-201ENST00000580065 1175 ntBASIC18.12■□□□□ 0.49
PDGFAP04085 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.12■□□□□ 0.49
PDGFAP04085 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.12■□□□□ 0.49
PDGFAP04085 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.12■□□□□ 0.49
PDGFAP04085 KRT8P17-201ENST00000453110 1448 ntBASIC18.12■□□□□ 0.49
PDGFAP04085 AP006587.1-201ENST00000534129 1502 ntBASIC18.12■□□□□ 0.49
PDGFAP04085 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDGFAP04085 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFAP04085 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.11■□□□□ 0.49
PDGFAP04085 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFAP04085 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFAP04085 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFAP04085 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFAP04085 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFAP04085 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFAP04085 TSPY14P-201ENST00000303979 915 ntBASIC18.11■□□□□ 0.49
PDGFAP04085 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFAP04085 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.11■□□□□ 0.49
PDGFAP04085 EGLN1P1-201ENST00000531623 762 ntBASIC18.11■□□□□ 0.49
PDGFAP04085 AC026271.3-201ENST00000571884 352 ntBASIC18.11■□□□□ 0.49
PDGFAP04085 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PDGFAP04085 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.11■□□□□ 0.49
PDGFAP04085 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.11■□□□□ 0.49
PDGFAP04085 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PDGFAP04085 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFAP04085 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFAP04085 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms