Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFNB1P01574 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IFNB1P01574 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
IFNB1P01574 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFNB1P01574 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFNB1P01574 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.08■□□□□ 0.81
IFNB1P01574 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.08■□□□□ 0.81
IFNB1P01574 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
IFNB1P01574 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.08■□□□□ 0.81
IFNB1P01574 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFNB1P01574 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFNB1P01574 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
IFNB1P01574 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IFNB1P01574 AC006557.6-201ENST00000623071 864 ntBASIC20.08■□□□□ 0.81
IFNB1P01574 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFNB1P01574 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFNB1P01574 AC124283.5-201ENST00000624661 1809 ntBASIC20.08■□□□□ 0.8
IFNB1P01574 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFNB1P01574 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFNB1P01574 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
IFNB1P01574 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
IFNB1P01574 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFNB1P01574 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
IFNB1P01574 LINC01465-201ENST00000408887 1940 ntBASIC20.08■□□□□ 0.8
IFNB1P01574 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IFNB1P01574 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IFNB1P01574 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.07■□□□□ 0.8
IFNB1P01574 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.07■□□□□ 0.8
IFNB1P01574 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.07■□□□□ 0.8
IFNB1P01574 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IFNB1P01574 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.07■□□□□ 0.8
IFNB1P01574 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.07■□□□□ 0.8
IFNB1P01574 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.07■□□□□ 0.8
IFNB1P01574 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
IFNB1P01574 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.07■□□□□ 0.8
IFNB1P01574 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.07■□□□□ 0.8
IFNB1P01574 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.07■□□□□ 0.8
IFNB1P01574 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.07■□□□□ 0.8
IFNB1P01574 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
IFNB1P01574 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFNB1P01574 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
IFNB1P01574 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.06■□□□□ 0.8
IFNB1P01574 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.06■□□□□ 0.8
IFNB1P01574 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.06■□□□□ 0.8
IFNB1P01574 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.06■□□□□ 0.8
IFNB1P01574 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.06■□□□□ 0.8
IFNB1P01574 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.06■□□□□ 0.8
IFNB1P01574 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.06■□□□□ 0.8
IFNB1P01574 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.06■□□□□ 0.8
IFNB1P01574 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.06■□□□□ 0.8
IFNB1P01574 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
IFNB1P01574 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
IFNB1P01574 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.06■□□□□ 0.8
IFNB1P01574 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IFNB1P01574 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
IFNB1P01574 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
IFNB1P01574 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFNB1P01574 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
IFNB1P01574 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFNB1P01574 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
IFNB1P01574 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
IFNB1P01574 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.05■□□□□ 0.8
IFNB1P01574 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
IFNB1P01574 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFNB1P01574 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFNB1P01574 AC073210.2-201ENST00000430369 194 ntBASIC20.05■□□□□ 0.8
IFNB1P01574 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.05■□□□□ 0.8
IFNB1P01574 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.05■□□□□ 0.8
IFNB1P01574 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
IFNB1P01574 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.05■□□□□ 0.8
IFNB1P01574 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.05■□□□□ 0.8
IFNB1P01574 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.05■□□□□ 0.8
IFNB1P01574 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
IFNB1P01574 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
IFNB1P01574 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms