Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM8O95777 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM8O95777 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM8O95777 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LSM8O95777 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM8O95777 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LSM8O95777 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM8O95777 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LSM8O95777 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM8O95777 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.5■□□□□ 0.87
LSM8O95777 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.5■□□□□ 0.87
LSM8O95777 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LSM8O95777 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.5■□□□□ 0.87
LSM8O95777 KRT16P5-201ENST00000455284 522 ntBASIC20.5■□□□□ 0.87
LSM8O95777 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.5■□□□□ 0.87
LSM8O95777 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.5■□□□□ 0.87
LSM8O95777 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.5■□□□□ 0.87
LSM8O95777 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.5■□□□□ 0.87
LSM8O95777 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.5■□□□□ 0.87
LSM8O95777 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.5■□□□□ 0.87
LSM8O95777 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM8O95777 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.5■□□□□ 0.87
LSM8O95777 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LSM8O95777 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LSM8O95777 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LSM8O95777 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.49■□□□□ 0.87
LSM8O95777 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LSM8O95777 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.49■□□□□ 0.87
LSM8O95777 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LSM8O95777 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LSM8O95777 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.49■□□□□ 0.87
LSM8O95777 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.49■□□□□ 0.87
LSM8O95777 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.49■□□□□ 0.87
LSM8O95777 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
LSM8O95777 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.49■□□□□ 0.87
LSM8O95777 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
LSM8O95777 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.49■□□□□ 0.87
LSM8O95777 BX323043.1-201ENST00000641006 1765 ntBASIC20.49■□□□□ 0.87
LSM8O95777 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.49■□□□□ 0.87
LSM8O95777 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSM8O95777 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.48■□□□□ 0.87
LSM8O95777 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.48■□□□□ 0.87
LSM8O95777 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.48■□□□□ 0.87
LSM8O95777 SDHAP1-207ENST00000440850 2000 ntBASIC20.48■□□□□ 0.87
LSM8O95777 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM8O95777 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM8O95777 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.48■□□□□ 0.87
LSM8O95777 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LSM8O95777 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSM8O95777 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.48■□□□□ 0.87
LSM8O95777 AC110285.5-201ENST00000611501 352 ntBASIC20.48■□□□□ 0.87
LSM8O95777 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.48■□□□□ 0.87
LSM8O95777 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM8O95777 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM8O95777 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.48■□□□□ 0.87
LSM8O95777 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM8O95777 AC141586.3-201ENST00000562166 1838 ntBASIC20.48■□□□□ 0.87
LSM8O95777 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LSM8O95777 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM8O95777 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LSM8O95777 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.47■□□□□ 0.87
LSM8O95777 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.47■□□□□ 0.87
LSM8O95777 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LSM8O95777 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
LSM8O95777 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LSM8O95777 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.47■□□□□ 0.87
LSM8O95777 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LSM8O95777 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM8O95777 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LSM8O95777 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms