Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CDRT1O95170 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDRT1O95170 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDRT1O95170 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 WIZP1-201ENST00000531444 2299 ntBASIC17.31■□□□□ 0.36
CDRT1O95170 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDRT1O95170 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDRT1O95170 YBX1P1-201ENST00000445822 960 ntBASIC17.31■□□□□ 0.36
CDRT1O95170 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.31■□□□□ 0.36
CDRT1O95170 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 KRT18P14-201ENST00000534205 1250 ntBASIC17.31■□□□□ 0.36
CDRT1O95170 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDRT1O95170 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDRT1O95170 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CDRT1O95170 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.31■□□□□ 0.36
CDRT1O95170 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.31■□□□□ 0.36
CDRT1O95170 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.31■□□□□ 0.36
CDRT1O95170 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDRT1O95170 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDRT1O95170 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CDRT1O95170 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.3■□□□□ 0.36
CDRT1O95170 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.3■□□□□ 0.36
CDRT1O95170 AP001271.2-201ENST00000624018 1556 ntBASIC17.3■□□□□ 0.36
CDRT1O95170 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.3■□□□□ 0.36
CDRT1O95170 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.3■□□□□ 0.36
CDRT1O95170 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.3■□□□□ 0.36
CDRT1O95170 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDRT1O95170 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.29■□□□□ 0.36
CDRT1O95170 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.29■□□□□ 0.36
CDRT1O95170 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.29■□□□□ 0.36
CDRT1O95170 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.29■□□□□ 0.36
CDRT1O95170 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.29■□□□□ 0.36
CDRT1O95170 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.29■□□□□ 0.36
CDRT1O95170 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 AC243732.1-201ENST00000612648 864 ntBASIC17.29■□□□□ 0.36
CDRT1O95170 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.29■□□□□ 0.36
CDRT1O95170 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDRT1O95170 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDRT1O95170 AP000997.3-201ENST00000623333 2250 ntBASIC17.29■□□□□ 0.36
CDRT1O95170 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDRT1O95170 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDRT1O95170 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDRT1O95170 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.29■□□□□ 0.36
CDRT1O95170 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDRT1O95170 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.28■□□□□ 0.36
CDRT1O95170 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.28■□□□□ 0.36
CDRT1O95170 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.28■□□□□ 0.36
CDRT1O95170 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.28■□□□□ 0.36
CDRT1O95170 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.28■□□□□ 0.36
CDRT1O95170 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CDRT1O95170 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.28■□□□□ 0.36
CDRT1O95170 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.28■□□□□ 0.36
CDRT1O95170 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDRT1O95170 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms