Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.65■□□□□ 0.74
USP1O94782 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.65■□□□□ 0.74
USP1O94782 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.65■□□□□ 0.74
USP1O94782 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.65■□□□□ 0.74
USP1O94782 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP1O94782 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
USP1O94782 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP1O94782 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.64■□□□□ 0.74
USP1O94782 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
USP1O94782 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP1O94782 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP1O94782 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.64■□□□□ 0.73
USP1O94782 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.64■□□□□ 0.73
USP1O94782 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.64■□□□□ 0.73
USP1O94782 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.64■□□□□ 0.73
USP1O94782 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.64■□□□□ 0.73
USP1O94782 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.64■□□□□ 0.73
USP1O94782 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP1O94782 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
USP1O94782 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.64■□□□□ 0.73
USP1O94782 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.64■□□□□ 0.73
USP1O94782 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP1O94782 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP1O94782 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP1O94782 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP1O94782 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
USP1O94782 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.64■□□□□ 0.73
USP1O94782 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.64■□□□□ 0.73
USP1O94782 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.64■□□□□ 0.73
USP1O94782 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP1O94782 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.63■□□□□ 0.73
USP1O94782 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 AC124283.5-201ENST00000624661 1809 ntBASIC19.63■□□□□ 0.73
USP1O94782 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.63■□□□□ 0.73
USP1O94782 RPS2P52-201ENST00000469610 820 ntBASIC19.63■□□□□ 0.73
USP1O94782 AC097658.1-201ENST00000475555 843 ntBASIC19.63■□□□□ 0.73
USP1O94782 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.63■□□□□ 0.73
USP1O94782 HLA-B-256ENST00000639848 1089 ntBASIC19.63■□□□□ 0.73
USP1O94782 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP1O94782 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP1O94782 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 AC092368.3-202ENST00000574180 1591 ntBASIC19.62■□□□□ 0.73
USP1O94782 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
USP1O94782 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.62■□□□□ 0.73
USP1O94782 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
USP1O94782 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP1O94782 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.62■□□□□ 0.73
USP1O94782 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.62■□□□□ 0.73
USP1O94782 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
USP1O94782 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
USP1O94782 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.62■□□□□ 0.73
USP1O94782 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP1O94782 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.62■□□□□ 0.73
USP1O94782 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.61■□□□□ 0.73
USP1O94782 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
USP1O94782 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.61■□□□□ 0.73
USP1O94782 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 AL138781.1-201ENST00000566567 1274 ntBASIC19.61■□□□□ 0.73
USP1O94782 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
USP1O94782 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.61■□□□□ 0.73
USP1O94782 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.61■□□□□ 0.73
USP1O94782 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.61■□□□□ 0.73
USP1O94782 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
USP1O94782 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP1O94782 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
USP1O94782 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
USP1O94782 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP1O94782 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.6■□□□□ 0.73
USP1O94782 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP1O94782 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.6■□□□□ 0.73
USP1O94782 NEFHP1-201ENST00000412845 2629 ntBASIC19.6■□□□□ 0.73
USP1O94782 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms