Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.42■□□□□ 0.38
PFDN1O60925 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.42■□□□□ 0.38
PFDN1O60925 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PFDN1O60925 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PFDN1O60925 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PFDN1O60925 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PFDN1O60925 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PFDN1O60925 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PFDN1O60925 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.41■□□□□ 0.38
PFDN1O60925 AD000864.1-201ENST00000624076 2295 ntBASIC17.41■□□□□ 0.38
PFDN1O60925 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PFDN1O60925 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PFDN1O60925 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PFDN1O60925 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PFDN1O60925 ESPNP-201ENST00000270691 2015 ntBASIC17.41■□□□□ 0.38
PFDN1O60925 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PFDN1O60925 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.41■□□□□ 0.38
PFDN1O60925 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PFDN1O60925 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PFDN1O60925 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PFDN1O60925 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PFDN1O60925 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PFDN1O60925 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.41■□□□□ 0.38
PFDN1O60925 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.41■□□□□ 0.38
PFDN1O60925 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.41■□□□□ 0.38
PFDN1O60925 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PFDN1O60925 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PFDN1O60925 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PFDN1O60925 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.4■□□□□ 0.38
PFDN1O60925 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PFDN1O60925 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.4■□□□□ 0.38
PFDN1O60925 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 ECEL1P2-201ENST00000461596 1295 ntBASIC17.4■□□□□ 0.38
PFDN1O60925 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 AC079089.2-201ENST00000531211 1277 ntBASIC17.4■□□□□ 0.38
PFDN1O60925 AC026202.3-201ENST00000600805 1127 ntBASIC17.4■□□□□ 0.38
PFDN1O60925 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.4■□□□□ 0.38
PFDN1O60925 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PFDN1O60925 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PFDN1O60925 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PFDN1O60925 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.4■□□□□ 0.38
PFDN1O60925 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PFDN1O60925 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PFDN1O60925 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PFDN1O60925 AC126763.1-201ENST00000552015 2118 ntBASIC17.39■□□□□ 0.38
PFDN1O60925 ABALON-201ENST00000629058 1903 ntBASIC17.39■□□□□ 0.37
PFDN1O60925 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.39■□□□□ 0.37
PFDN1O60925 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PFDN1O60925 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.39■□□□□ 0.37
PFDN1O60925 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.39■□□□□ 0.37
PFDN1O60925 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.39■□□□□ 0.37
PFDN1O60925 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.39■□□□□ 0.37
PFDN1O60925 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PFDN1O60925 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.39■□□□□ 0.37
PFDN1O60925 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PFDN1O60925 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PFDN1O60925 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.38■□□□□ 0.37
PFDN1O60925 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
PFDN1O60925 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.38■□□□□ 0.37
PFDN1O60925 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 AC073592.3-201ENST00000625118 1834 ntBASIC17.38■□□□□ 0.37
PFDN1O60925 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.38■□□□□ 0.37
PFDN1O60925 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.38■□□□□ 0.37
PFDN1O60925 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PFDN1O60925 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.38■□□□□ 0.37
PFDN1O60925 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PFDN1O60925 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms