Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.24■□□□□ 0.83
OPHN1O60890 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.23■□□□□ 0.83
OPHN1O60890 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.23■□□□□ 0.83
OPHN1O60890 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.23■□□□□ 0.83
OPHN1O60890 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPHN1O60890 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.23■□□□□ 0.83
OPHN1O60890 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
OPHN1O60890 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.22■□□□□ 0.83
OPHN1O60890 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.22■□□□□ 0.83
OPHN1O60890 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.22■□□□□ 0.83
OPHN1O60890 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.22■□□□□ 0.83
OPHN1O60890 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.22■□□□□ 0.83
OPHN1O60890 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.22■□□□□ 0.83
OPHN1O60890 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
OPHN1O60890 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
OPHN1O60890 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
OPHN1O60890 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
OPHN1O60890 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.21■□□□□ 0.83
OPHN1O60890 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.21■□□□□ 0.83
OPHN1O60890 MIR4785-201ENST00000585005 73 ntBASIC20.21■□□□□ 0.83
OPHN1O60890 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
OPHN1O60890 AC133561.5-201ENST00000635547 218 ntBASIC20.21■□□□□ 0.83
OPHN1O60890 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.21■□□□□ 0.83
OPHN1O60890 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.21■□□□□ 0.83
OPHN1O60890 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPHN1O60890 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
OPHN1O60890 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.2■□□□□ 0.83
OPHN1O60890 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
OPHN1O60890 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
OPHN1O60890 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.2■□□□□ 0.82
OPHN1O60890 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 AL135905.2-201ENST00000584934 1404 ntBASIC20.2■□□□□ 0.82
OPHN1O60890 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
OPHN1O60890 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
OPHN1O60890 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.2■□□□□ 0.82
OPHN1O60890 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.2■□□□□ 0.82
OPHN1O60890 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
OPHN1O60890 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.2■□□□□ 0.82
OPHN1O60890 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
OPHN1O60890 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPHN1O60890 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms