Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AC093827.2-201ENST00000512654 315 ntBASIC19.24■□□□□ 0.67
KLHL41O60662 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
KLHL41O60662 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.24■□□□□ 0.67
KLHL41O60662 AC008687.6-201ENST00000596318 630 ntBASIC19.24■□□□□ 0.67
KLHL41O60662 AL589743.5-201ENST00000616611 1050 ntBASIC19.24■□□□□ 0.67
KLHL41O60662 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KLHL41O60662 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
KLHL41O60662 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.24■□□□□ 0.67
KLHL41O60662 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.24■□□□□ 0.67
KLHL41O60662 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
KLHL41O60662 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 LINC01465-201ENST00000408887 1940 ntBASIC19.23■□□□□ 0.67
KLHL41O60662 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
KLHL41O60662 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
KLHL41O60662 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.23■□□□□ 0.67
KLHL41O60662 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.23■□□□□ 0.67
KLHL41O60662 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.23■□□□□ 0.67
KLHL41O60662 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
KLHL41O60662 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.23■□□□□ 0.67
KLHL41O60662 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.23■□□□□ 0.67
KLHL41O60662 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.23■□□□□ 0.67
KLHL41O60662 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
KLHL41O60662 AC138932.1-201ENST00000534164 6830 ntBASIC19.23■□□□□ 0.67
KLHL41O60662 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KLHL41O60662 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.23■□□□□ 0.67
KLHL41O60662 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
KLHL41O60662 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.22■□□□□ 0.67
KLHL41O60662 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
KLHL41O60662 PTBP1P-201ENST00000554374 1601 ntBASIC19.22■□□□□ 0.67
KLHL41O60662 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.22■□□□□ 0.67
KLHL41O60662 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KLHL41O60662 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
KLHL41O60662 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
KLHL41O60662 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.22■□□□□ 0.67
KLHL41O60662 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.22■□□□□ 0.67
KLHL41O60662 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
KLHL41O60662 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KLHL41O60662 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KLHL41O60662 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 PRORSD1P-201ENST00000295112 541 ntBASIC19.21■□□□□ 0.67
KLHL41O60662 MCRIP2P1-201ENST00000394346 511 ntBASIC19.21■□□□□ 0.67
KLHL41O60662 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
KLHL41O60662 AC026366.1-201ENST00000488803 879 ntBASIC19.21■□□□□ 0.67
KLHL41O60662 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.21■□□□□ 0.67
KLHL41O60662 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.21■□□□□ 0.67
KLHL41O60662 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KLHL41O60662 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.21■□□□□ 0.67
KLHL41O60662 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.21■□□□□ 0.67
KLHL41O60662 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.21■□□□□ 0.67
KLHL41O60662 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.21■□□□□ 0.67
KLHL41O60662 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.21■□□□□ 0.67
KLHL41O60662 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.21■□□□□ 0.67
KLHL41O60662 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KLHL41O60662 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.21■□□□□ 0.67
KLHL41O60662 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms