Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TSPAN3O60637 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TSPAN3O60637 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.04■□□□□ 0.8
TSPAN3O60637 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 UNC93B2-201ENST00000285383 730 ntBASIC20.04■□□□□ 0.8
TSPAN3O60637 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.04■□□□□ 0.8
TSPAN3O60637 AL390955.1-201ENST00000428694 934 ntBASIC20.04■□□□□ 0.8
TSPAN3O60637 AC011506.1-201ENST00000474329 610 ntBASIC20.04■□□□□ 0.8
TSPAN3O60637 AC116562.2-201ENST00000507042 360 ntBASIC20.04■□□□□ 0.8
TSPAN3O60637 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.04■□□□□ 0.8
TSPAN3O60637 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.04■□□□□ 0.8
TSPAN3O60637 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.04■□□□□ 0.8
TSPAN3O60637 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.04■□□□□ 0.8
TSPAN3O60637 AC133561.5-201ENST00000635547 218 ntBASIC20.04■□□□□ 0.8
TSPAN3O60637 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TSPAN3O60637 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.04■□□□□ 0.8
TSPAN3O60637 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN3O60637 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN3O60637 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN3O60637 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN3O60637 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN3O60637 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.03■□□□□ 0.8
TSPAN3O60637 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TSPAN3O60637 MMP23A-201ENST00000234610 1017 ntBASIC20.03■□□□□ 0.8
TSPAN3O60637 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TSPAN3O60637 MESTP1-201ENST00000404287 994 ntBASIC20.03■□□□□ 0.8
TSPAN3O60637 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.03■□□□□ 0.8
TSPAN3O60637 MIR1238-201ENST00000408483 83 ntBASIC20.03■□□□□ 0.8
TSPAN3O60637 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN3O60637 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.03■□□□□ 0.8
TSPAN3O60637 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.03■□□□□ 0.8
TSPAN3O60637 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.03■□□□□ 0.8
TSPAN3O60637 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.03■□□□□ 0.8
TSPAN3O60637 MIR6786-201ENST00000616843 113 ntBASIC20.03■□□□□ 0.8
TSPAN3O60637 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.03■□□□□ 0.8
TSPAN3O60637 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN3O60637 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.03■□□□□ 0.8
TSPAN3O60637 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TSPAN3O60637 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN3O60637 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.03■□□□□ 0.8
TSPAN3O60637 KRT8P9-201ENST00000558927 1449 ntBASIC20.02■□□□□ 0.8
TSPAN3O60637 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN3O60637 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN3O60637 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN3O60637 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TSPAN3O60637 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.02■□□□□ 0.8
TSPAN3O60637 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN3O60637 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN3O60637 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.02■□□□□ 0.8
TSPAN3O60637 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.02■□□□□ 0.8
TSPAN3O60637 LINC01023-201ENST00000606054 436 ntBASIC20.02■□□□□ 0.8
TSPAN3O60637 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN3O60637 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN3O60637 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN3O60637 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN3O60637 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
TSPAN3O60637 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.01■□□□□ 0.79
TSPAN3O60637 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN3O60637 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.01■□□□□ 0.79
TSPAN3O60637 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN3O60637 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.01■□□□□ 0.79
TSPAN3O60637 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN3O60637 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.01■□□□□ 0.79
TSPAN3O60637 B3GAT3P1-201ENST00000471720 806 ntBASIC20.01■□□□□ 0.79
TSPAN3O60637 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TSPAN3O60637 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.01■□□□□ 0.79
TSPAN3O60637 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN3O60637 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN3O60637 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TSPAN3O60637 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.01■□□□□ 0.79
TSPAN3O60637 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20■□□□□ 0.79
TSPAN3O60637 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TSPAN3O60637 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 FSCN1P1-201ENST00000568912 1481 ntBASIC20■□□□□ 0.79
TSPAN3O60637 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms