Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 FSCN1P1-201ENST00000568912 1481 ntBASIC18.33■□□□□ 0.52
FOXS1O43638 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.33■□□□□ 0.52
FOXS1O43638 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXS1O43638 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 RBM17P1-201ENST00000453646 1190 ntBASIC18.32■□□□□ 0.52
FOXS1O43638 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.32■□□□□ 0.52
FOXS1O43638 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FOXS1O43638 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXS1O43638 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXS1O43638 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXS1O43638 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXS1O43638 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FOXS1O43638 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
FOXS1O43638 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXS1O43638 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXS1O43638 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXS1O43638 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXS1O43638 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
FOXS1O43638 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXS1O43638 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
FOXS1O43638 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXS1O43638 RCC2P6-201ENST00000526625 1557 ntBASIC18.31■□□□□ 0.52
FOXS1O43638 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXS1O43638 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXS1O43638 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
FOXS1O43638 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXS1O43638 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.31■□□□□ 0.52
FOXS1O43638 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.31■□□□□ 0.52
FOXS1O43638 AC008040.2-201ENST00000461049 708 ntBASIC18.31■□□□□ 0.52
FOXS1O43638 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.31■□□□□ 0.52
FOXS1O43638 BX088651.1-201ENST00000540551 451 ntBASIC18.31■□□□□ 0.52
FOXS1O43638 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXS1O43638 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.31■□□□□ 0.52
FOXS1O43638 AC130371.2-201ENST00000619443 611 ntBASIC18.31■□□□□ 0.52
FOXS1O43638 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXS1O43638 AC104417.2-201ENST00000562989 1793 ntBASIC18.31■□□□□ 0.52
FOXS1O43638 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXS1O43638 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXS1O43638 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXS1O43638 AC079598.2-202ENST00000546624 1451 ntBASIC18.31■□□□□ 0.52
FOXS1O43638 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXS1O43638 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXS1O43638 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXS1O43638 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
FOXS1O43638 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXS1O43638 ZNF815P-204ENST00000434898 1737 ntBASIC18.3■□□□□ 0.52
FOXS1O43638 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
FOXS1O43638 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXS1O43638 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXS1O43638 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXS1O43638 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXS1O43638 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXS1O43638 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXS1O43638 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXS1O43638 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
FOXS1O43638 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
FOXS1O43638 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXS1O43638 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FOXS1O43638 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXS1O43638 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXS1O43638 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXS1O43638 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXS1O43638 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXS1O43638 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXS1O43638 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXS1O43638 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
FOXS1O43638 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXS1O43638 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
FOXS1O43638 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXS1O43638 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXS1O43638 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXS1O43638 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXS1O43638 UNC93B2-201ENST00000285383 730 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms