Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.68■□□□□ 0.42
RNF13O43567 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RNF13O43567 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RNF13O43567 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF13O43567 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RNF13O43567 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 AC116351.2-201ENST00000606540 1585 ntBASIC17.67■□□□□ 0.42
RNF13O43567 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF13O43567 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF13O43567 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF13O43567 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.67■□□□□ 0.42
RNF13O43567 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF13O43567 AC133041.1-202ENST00000642053 222 ntBASIC17.67■□□□□ 0.42
RNF13O43567 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF13O43567 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF13O43567 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF13O43567 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RNF13O43567 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF13O43567 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF13O43567 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RNF13O43567 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF13O43567 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF13O43567 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF13O43567 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF13O43567 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF13O43567 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF13O43567 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 AC098934.4-201ENST00000564127 592 ntBASIC17.66■□□□□ 0.42
RNF13O43567 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.66■□□□□ 0.42
RNF13O43567 AC104771.1-201ENST00000603335 964 ntBASIC17.66■□□□□ 0.42
RNF13O43567 HLA-B-256ENST00000639848 1089 ntBASIC17.66■□□□□ 0.42
RNF13O43567 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF13O43567 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF13O43567 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF13O43567 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF13O43567 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF13O43567 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RNF13O43567 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF13O43567 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF13O43567 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
RNF13O43567 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF13O43567 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF13O43567 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF13O43567 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF13O43567 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms