Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNPHO15079 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNPHO15079 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.31■□□□□ 0.52
SNPHO15079 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 AIRN-201ENST00000601203 4374 ntBASIC18.3■□□□□ 0.52
SNPHO15079 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SNPHO15079 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SNPHO15079 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.3■□□□□ 0.52
SNPHO15079 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.3■□□□□ 0.52
SNPHO15079 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNPHO15079 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC18.3■□□□□ 0.52
SNPHO15079 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.3■□□□□ 0.52
SNPHO15079 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.3■□□□□ 0.52
SNPHO15079 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 DPP3P2-201ENST00000416030 1696 ntBASIC18.3■□□□□ 0.52
SNPHO15079 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.3■□□□□ 0.52
SNPHO15079 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.3■□□□□ 0.52
SNPHO15079 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNPHO15079 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 AC112907.3-201ENST00000577781 2400 ntBASIC18.3■□□□□ 0.52
SNPHO15079 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 NEFHP1-201ENST00000412845 2629 ntBASIC18.3■□□□□ 0.52
SNPHO15079 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNPHO15079 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.29■□□□□ 0.52
SNPHO15079 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SNPHO15079 ITM2C-210ENST00000620962 501 ntBASIC18.29■□□□□ 0.52
SNPHO15079 AC006557.6-201ENST00000623071 864 ntBASIC18.29■□□□□ 0.52
SNPHO15079 AC103798.2-201ENST00000624292 632 ntBASIC18.29■□□□□ 0.52
SNPHO15079 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.29■□□□□ 0.52
SNPHO15079 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.29■□□□□ 0.52
SNPHO15079 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.29■□□□□ 0.52
SNPHO15079 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.29■□□□□ 0.52
SNPHO15079 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SNPHO15079 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.29■□□□□ 0.52
SNPHO15079 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.29■□□□□ 0.52
SNPHO15079 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SNPHO15079 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNPHO15079 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNPHO15079 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.28■□□□□ 0.52
SNPHO15079 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.28■□□□□ 0.52
SNPHO15079 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.28■□□□□ 0.52
SNPHO15079 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.28■□□□□ 0.52
SNPHO15079 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.28■□□□□ 0.52
SNPHO15079 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.28■□□□□ 0.52
SNPHO15079 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.28■□□□□ 0.52
SNPHO15079 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.28■□□□□ 0.52
SNPHO15079 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.28■□□□□ 0.52
SNPHO15079 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SNPHO15079 AC008687.6-201ENST00000596318 630 ntBASIC18.28■□□□□ 0.52
SNPHO15079 AL031963.3-201ENST00000606441 850 ntBASIC18.28■□□□□ 0.52
SNPHO15079 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC18.28■□□□□ 0.52
SNPHO15079 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.28■□□□□ 0.52
SNPHO15079 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.28■□□□□ 0.52
SNPHO15079 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.28■□□□□ 0.52
SNPHO15079 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SNPHO15079 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNPHO15079 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNPHO15079 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.27■□□□□ 0.52
SNPHO15079 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNPHO15079 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNPHO15079 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.27■□□□□ 0.52
SNPHO15079 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNPHO15079 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SNPHO15079 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.27■□□□□ 0.52
SNPHO15079 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNPHO15079 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNPHO15079 Z97985.1-201ENST00000332270 946 ntBASIC18.27■□□□□ 0.52
SNPHO15079 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNPHO15079 HLA-G-202ENST00000376815 851 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms