Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC091304.2-201ENST00000564639 760 ntBASIC31.61■■■□□ 2.65
CHD1O14646 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHD1O14646 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC31.61■■■□□ 2.65
CHD1O14646 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CHD1O14646 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC31.61■■■□□ 2.65
CHD1O14646 FAM220CP-201ENST00000395253 831 ntBASIC31.61■■■□□ 2.65
CHD1O14646 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
CHD1O14646 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC31.61■■■□□ 2.65
CHD1O14646 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC31.61■■■□□ 2.65
CHD1O14646 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC31.61■■■□□ 2.65
CHD1O14646 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC31.6■■■□□ 2.65
CHD1O14646 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHD1O14646 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHD1O14646 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC31.6■■■□□ 2.65
CHD1O14646 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CHD1O14646 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC31.6■■■□□ 2.65
CHD1O14646 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC31.6■■■□□ 2.65
CHD1O14646 SPEG-225ENST00000617028 815 ntTSL 5 BASIC31.6■■■□□ 2.65
CHD1O14646 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC31.6■■■□□ 2.65
CHD1O14646 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC31.59■■■□□ 2.65
CHD1O14646 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC31.59■■■□□ 2.65
CHD1O14646 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
CHD1O14646 HLA-F-220ENST00000434407 884 ntBASIC31.59■■■□□ 2.65
CHD1O14646 AC074051.2-201ENST00000565115 352 ntBASIC31.59■■■□□ 2.65
CHD1O14646 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC31.59■■■□□ 2.65
CHD1O14646 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHD1O14646 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHD1O14646 AC036111.1-201ENST00000533973 1582 ntBASIC31.59■■■□□ 2.65
CHD1O14646 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHD1O14646 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CHD1O14646 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC31.58■■■□□ 2.65
CHD1O14646 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC31.58■■■□□ 2.65
CHD1O14646 AP001005.1-201ENST00000571755 1248 ntBASIC31.58■■■□□ 2.65
CHD1O14646 ABR-217ENST00000572441 563 ntTSL 4 BASIC31.58■■■□□ 2.65
CHD1O14646 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC31.58■■■□□ 2.65
CHD1O14646 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHD1O14646 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC31.58■■■□□ 2.65
CHD1O14646 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC31.58■■■□□ 2.65
CHD1O14646 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC31.58■■■□□ 2.65
CHD1O14646 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC31.58■■■□□ 2.65
CHD1O14646 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHD1O14646 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHD1O14646 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHD1O14646 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC31.58■■■□□ 2.65
CHD1O14646 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC31.58■■■□□ 2.65
CHD1O14646 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC31.58■■■□□ 2.65
CHD1O14646 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
CHD1O14646 HOTTIP_1.1-201ENST00000620415 57 ntBASIC31.58■■■□□ 2.65
CHD1O14646 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
CHD1O14646 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
CHD1O14646 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC31.57■■■□□ 2.65
CHD1O14646 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CHD1O14646 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC31.57■■■□□ 2.64
CHD1O14646 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CHD1O14646 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC31.57■■■□□ 2.64
CHD1O14646 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CHD1O14646 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC31.56■■■□□ 2.64
CHD1O14646 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHD1O14646 KRT18P58-201ENST00000527480 1120 ntBASIC31.56■■■□□ 2.64
CHD1O14646 AC079602.3-201ENST00000623931 403 ntBASIC31.56■■■□□ 2.64
CHD1O14646 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
CHD1O14646 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC31.56■■■□□ 2.64
CHD1O14646 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHD1O14646 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.56■■■□□ 2.64
CHD1O14646 LINC00167-201ENST00000530583 1419 ntBASIC31.56■■■□□ 2.64
CHD1O14646 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHD1O14646 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHD1O14646 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC31.55■■■□□ 2.64
CHD1O14646 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC31.55■■■□□ 2.64
CHD1O14646 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 AL117328.2-201ENST00000624617 1940 ntBASIC31.55■■■□□ 2.64
CHD1O14646 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC31.55■■■□□ 2.64
CHD1O14646 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CHD1O14646 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC31.55■■■□□ 2.64
CHD1O14646 AC104819.1-201ENST00000504587 486 ntBASIC31.55■■■□□ 2.64
CHD1O14646 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 ABR-204ENST00000543210 1049 ntTSL 2 BASIC31.55■■■□□ 2.64
CHD1O14646 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1O14646 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHD1O14646 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
CHD1O14646 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHD1O14646 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHD1O14646 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC31.54■■■□□ 2.64
CHD1O14646 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHD1O14646 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHD1O14646 TSPY22P-201ENST00000427496 604 ntBASIC31.54■■■□□ 2.64
CHD1O14646 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CHD1O14646 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC31.54■■■□□ 2.64
CHD1O14646 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CHD1O14646 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHD1O14646 SAPCD2P3-201ENST00000455031 850 ntBASIC31.53■■■□□ 2.64
CHD1O14646 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
CHD1O14646 RNF126P1-202ENST00000569893 925 ntBASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms