Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LST1O00453 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LST1O00453 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LST1O00453 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LST1O00453 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LST1O00453 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LST1O00453 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LST1O00453 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.64□□□□□ -0.39
LST1O00453 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC12.63□□□□□ -0.39
LST1O00453 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 AC126763.1-201ENST00000552015 2118 ntBASIC12.63□□□□□ -0.39
LST1O00453 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.63□□□□□ -0.39
LST1O00453 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.63□□□□□ -0.39
LST1O00453 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LST1O00453 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LST1O00453 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC12.62□□□□□ -0.39
LST1O00453 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.62□□□□□ -0.39
LST1O00453 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.62□□□□□ -0.39
LST1O00453 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.62□□□□□ -0.39
LST1O00453 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 GNAS-203ENST00000306120 1878 ntBASIC12.62□□□□□ -0.39
LST1O00453 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.62□□□□□ -0.39
LST1O00453 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LST1O00453 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LST1O00453 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC12.62□□□□□ -0.39
LST1O00453 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 pRNA.6-201ENST00000610482 90 ntBASIC12.62□□□□□ -0.39
LST1O00453 pRNA.5-201ENST00000612139 90 ntBASIC12.62□□□□□ -0.39
LST1O00453 pRNA.11-201ENST00000618423 90 ntBASIC12.62□□□□□ -0.39
LST1O00453 pRNA.13-201ENST00000619112 90 ntBASIC12.62□□□□□ -0.39
LST1O00453 AC241377.3-202ENST00000626088 1088 ntBASIC12.62□□□□□ -0.39
LST1O00453 AC241585.3-202ENST00000628937 1088 ntBASIC12.62□□□□□ -0.39
LST1O00453 AC245100.8-202ENST00000629247 1058 ntBASIC12.62□□□□□ -0.39
LST1O00453 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.62□□□□□ -0.39
LST1O00453 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.62□□□□□ -0.39
LST1O00453 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LST1O00453 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.62□□□□□ -0.39
LST1O00453 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms