Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTCAO00442 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTCAO00442 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTCAO00442 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTCAO00442 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RTCAO00442 TUBB8P6-201ENST00000436895 1288 ntBASIC18.53■□□□□ 0.56
RTCAO00442 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.53■□□□□ 0.56
RTCAO00442 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTCAO00442 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTCAO00442 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.53■□□□□ 0.56
RTCAO00442 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RTCAO00442 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.53■□□□□ 0.56
RTCAO00442 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.53■□□□□ 0.56
RTCAO00442 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RTCAO00442 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.53■□□□□ 0.56
RTCAO00442 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.53■□□□□ 0.56
RTCAO00442 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RTCAO00442 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.52■□□□□ 0.56
RTCAO00442 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 KRT8P8-201ENST00000434750 1448 ntBASIC18.52■□□□□ 0.56
RTCAO00442 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RTCAO00442 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.52■□□□□ 0.56
RTCAO00442 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTCAO00442 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTCAO00442 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTCAO00442 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RTCAO00442 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RTCAO00442 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
RTCAO00442 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RTCAO00442 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.51■□□□□ 0.55
RTCAO00442 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RTCAO00442 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.51■□□□□ 0.55
RTCAO00442 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 C1QBPP2-201ENST00000528754 825 ntBASIC18.51■□□□□ 0.55
RTCAO00442 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTCAO00442 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 AC124016.1-201ENST00000609552 612 ntBASIC18.51■□□□□ 0.55
RTCAO00442 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.51■□□□□ 0.55
RTCAO00442 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.51■□□□□ 0.55
RTCAO00442 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTCAO00442 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RTCAO00442 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RTCAO00442 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RTCAO00442 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RTCAO00442 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 AL032819.2-201ENST00000624543 2162 ntBASIC18.5■□□□□ 0.55
RTCAO00442 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.5■□□□□ 0.55
RTCAO00442 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.5■□□□□ 0.55
RTCAO00442 KRT18P29-201ENST00000397031 1267 ntBASIC18.5■□□□□ 0.55
RTCAO00442 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.5■□□□□ 0.55
RTCAO00442 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.5■□□□□ 0.55
RTCAO00442 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RTCAO00442 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.5■□□□□ 0.55
RTCAO00442 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.5■□□□□ 0.55
RTCAO00442 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.5■□□□□ 0.55
RTCAO00442 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RTCAO00442 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTCAO00442 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.5■□□□□ 0.55
RTCAO00442 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.5■□□□□ 0.55
RTCAO00442 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RTCAO00442 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTCAO00442 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms