Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.98■□□□□ 0.79
DFFAO00273 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.98■□□□□ 0.79
DFFAO00273 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DFFAO00273 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DFFAO00273 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.98■□□□□ 0.79
DFFAO00273 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DFFAO00273 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DFFAO00273 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DFFAO00273 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
DFFAO00273 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.97■□□□□ 0.79
DFFAO00273 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.97■□□□□ 0.79
DFFAO00273 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
DFFAO00273 AL158047.1-201ENST00000445918 881 ntBASIC19.97■□□□□ 0.79
DFFAO00273 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.97■□□□□ 0.79
DFFAO00273 AC098590.1-201ENST00000468126 897 ntBASIC19.97■□□□□ 0.79
DFFAO00273 AC142381.4-202ENST00000563973 229 ntBASIC19.97■□□□□ 0.79
DFFAO00273 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
DFFAO00273 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
DFFAO00273 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.97■□□□□ 0.79
DFFAO00273 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DFFAO00273 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.96■□□□□ 0.79
DFFAO00273 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.96■□□□□ 0.79
DFFAO00273 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
DFFAO00273 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.96■□□□□ 0.79
DFFAO00273 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
DFFAO00273 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
DFFAO00273 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.96■□□□□ 0.79
DFFAO00273 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.96■□□□□ 0.79
DFFAO00273 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
DFFAO00273 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
DFFAO00273 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.96■□□□□ 0.79
DFFAO00273 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.96■□□□□ 0.79
DFFAO00273 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.96■□□□□ 0.79
DFFAO00273 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
DFFAO00273 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.96■□□□□ 0.79
DFFAO00273 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
DFFAO00273 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
DFFAO00273 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
DFFAO00273 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 AC007952.6-201ENST00000573168 2673 ntBASIC19.95■□□□□ 0.78
DFFAO00273 AC003957.1-201ENST00000625108 2673 ntBASIC19.95■□□□□ 0.78
DFFAO00273 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.95■□□□□ 0.78
DFFAO00273 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
DFFAO00273 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.95■□□□□ 0.78
DFFAO00273 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
DFFAO00273 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.95■□□□□ 0.78
DFFAO00273 KRT16P5-201ENST00000455284 522 ntBASIC19.95■□□□□ 0.78
DFFAO00273 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.95■□□□□ 0.78
DFFAO00273 TMEM191A-211ENST00000637163 1067 ntBASIC19.95■□□□□ 0.78
DFFAO00273 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
DFFAO00273 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFAO00273 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
DFFAO00273 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.94■□□□□ 0.78
DFFAO00273 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DFFAO00273 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
DFFAO00273 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.94■□□□□ 0.78
DFFAO00273 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
DFFAO00273 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms