Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 AC018445.3-201ENST00000624177 1945 ntBASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV12-3A0A0B4J271 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 AC116351.2-201ENST00000606540 1585 ntBASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 AP000974.1-201ENST00000623909 2387 ntBASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 AC005829.2-201ENST00000571422 1056 ntBASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 AC092118.2-201ENST00000613495 667 ntBASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 AC006557.6-201ENST00000623071 864 ntBASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 AC098818.2-201ENST00000564925 2320 ntBASIC14.43□□□□□ -0.1
TRAV12-3A0A0B4J271 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms