Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 TERF1P5-201ENST00000477545 1207 ntBASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 AL031963.3-201ENST00000606441 850 ntBASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 KRT8P20-201ENST00000423953 1409 ntBASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 AP001271.2-201ENST00000624018 1556 ntBASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 AC010536.3-201ENST00000620306 533 ntBASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 PTBP1P-201ENST00000554374 1601 ntBASIC13.53□□□□□ -0.24
TRAV13-1A0A0B4J241 LINC01465-201ENST00000408887 1940 ntBASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV13-1A0A0B4J241 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms