Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-7A0A0A0MS04 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-7A0A0A0MS04 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-7A0A0A0MS04 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.27■□□□□ 0.19
TRBV6-7A0A0A0MS04 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TRBV6-7A0A0A0MS04 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-7A0A0A0MS04 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRBV6-7A0A0A0MS04 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TRBV6-7A0A0A0MS04 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-7A0A0A0MS04 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 AC026271.2-201ENST00000428091 497 ntBASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 AC093787.1-201ENST00000450396 207 ntBASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRBV6-7A0A0A0MS04 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 AC018553.1-201ENST00000616682 1458 ntBASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 NOC2LP2-201ENST00000407594 1944 ntBASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.25■□□□□ 0.19
TRBV6-7A0A0A0MS04 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 AC116351.2-201ENST00000606540 1585 ntBASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRBV6-7A0A0A0MS04 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-7A0A0A0MS04 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms