Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV27A0A087WT01 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 NCF1B-203ENST00000435988 1254 ntBASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV27A0A087WT01 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 AC092368.3-202ENST00000574180 1591 ntBASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV27A0A087WT01 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 TEX21P-204ENST00000641479 1693 ntBASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV27A0A087WT01 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 MIR4758-201ENST00000577688 71 ntBASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 ZNF815P-204ENST00000434898 1737 ntBASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 AL161938.1-201ENST00000569833 2180 ntBASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV27A0A087WT01 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms