Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 HLA-G-202ENST00000376815 851 ntBASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 HLA-G-203ENST00000376818 1127 ntBASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 AL591742.1-201ENST00000604433 565 ntBASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 AC079598.2-202ENST00000546624 1451 ntBASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.71■□□□□ 0.26
TRAV18A0A075B6X5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.71■□□□□ 0.26
TRAV18A0A075B6X5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 AL390961.4-201ENST00000623958 2535 ntBASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRAV18A0A075B6X5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV18A0A075B6X5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 AC142381.2-201ENST00000566120 298 ntBASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 UBE2DNL-204ENST00000602536 740 ntBASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV18A0A075B6X5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms