Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 CYCSP42-201ENST00000450823 238 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 AC097484.1-201ENST00000471148 389 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 RN7SKP66-201ENST00000516681 231 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 RN7SKP260-201ENST00000516907 149 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 SNRPGP1-201ENST00000553864 222 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 KATNBL1P5-201ENST00000605015 517 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 AC004825.2-201ENST00000616634 455 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 LINC01739-205ENST00000641890 573 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 RNA5SP305-201ENST00000362665 119 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 GLULP6-201ENST00000399502 913 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 EIF4A1P1-201ENST00000420241 934 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 PNRC2P1-201ENST00000423940 420 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 EIF2S2P3-201ENST00000428356 999 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC005189.1-201ENST00000431286 310 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 PTMAP6-201ENST00000439110 327 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC073850.1-201ENST00000449243 255 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 EIF2S2P5-201ENST00000457635 968 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 CYCSP34-201ENST00000458172 304 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 RPL7AP6-201ENST00000477943 801 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 PTP4A1P6-201ENST00000531034 478 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 AC083899.3-201ENST00000603413 594 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 MIR7155-201ENST00000615925 56 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 AP002799.1-201ENST00000623552 423 ntBASIC4.81□□□□□ -1.64
VMP1Q96GC9 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VMP1Q96GC9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.81□□□□□ -1.64
VMP1Q96GC9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VMP1Q96GC9 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VMP1Q96GC9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VMP1Q96GC9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VMP1Q96GC9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 THAP12P4-201ENST00000528321 2266 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 XIAPP3-201ENST00000312918 795 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC136624.1-201ENST00000400791 413 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AL121834.1-202ENST00000404494 277 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 HMGB3P18-201ENST00000406327 590 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC004987.3-201ENST00000413879 771 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 GTF2IP2-201ENST00000424290 697 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 NPM1P34-201ENST00000428821 893 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 LYPLA1P1-201ENST00000434514 622 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms