Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL021331.1-201ENST00000402817 582 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.76□□□□□ -1.65
HNF4AP41235 FAR1P1-201ENST00000427163 934 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 RBMY2QP-201ENST00000429799 1147 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.76□□□□□ -1.65
HNF4AP41235 RPL17P35-201ENST00000432217 549 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HNF4AP41235 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HNF4AP41235 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.76□□□□□ -1.65
HNF4AP41235 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.76□□□□□ -1.65
HNF4AP41235 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.76□□□□□ -1.65
HNF4AP41235 RN7SL97P-201ENST00000486780 299 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.76□□□□□ -1.65
HNF4AP41235 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.76□□□□□ -1.65
HNF4AP41235 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.76□□□□□ -1.65
HNF4AP41235 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.76□□□□□ -1.65
HNF4AP41235 AC110775.1-201ENST00000513721 462 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 HMGB1P19-201ENST00000517578 577 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.76□□□□□ -1.65
HNF4AP41235 DEFB109D-201ENST00000529497 240 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.76□□□□□ -1.65
HNF4AP41235 DYNLL1P4-201ENST00000549314 266 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HNF4AP41235 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.76□□□□□ -1.65
HNF4AP41235 AC233266.2-201ENST00000567067 528 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 HMGB2P1-201ENST00000591146 634 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.76□□□□□ -1.65
HNF4AP41235 AC135178.6-201ENST00000605314 398 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 AC211433.2-201ENST00000608433 387 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 AC018445.2-201ENST00000622987 260 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 AL353662.3-201ENST00000625131 237 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 CDRT1-208ENST00000630868 794 ntBASIC4.76□□□□□ -1.65
HNF4AP41235 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HNF4AP41235 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 AC090229.1-201ENST00000590983 1609 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HNF4AP41235 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HNF4AP41235 MAPK10-286ENST00000641208 8747 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 DDX18P5-201ENST00000534547 1306 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HNF4AP41235 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HNF4AP41235 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
HNF4AP41235 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HNF4AP41235 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 RNA5SP305-201ENST00000362665 119 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 RNU6-1279P-201ENST00000383917 103 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 ATP5F1P2-201ENST00000398143 760 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 MTND2P15-201ENST00000418575 892 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.75□□□□□ -1.65
HNF4AP41235 RWDD4P2-201ENST00000426392 563 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 BX119904.1-201ENST00000432026 348 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.75□□□□□ -1.65
HNF4AP41235 AL513321.1-201ENST00000441175 761 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.75□□□□□ -1.65
HNF4AP41235 AL935212.3-201ENST00000450729 284 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 AC004453.1-201ENST00000487895 408 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.75□□□□□ -1.65
HNF4AP41235 RNA5SP464-201ENST00000516251 108 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 RNA5SP360-201ENST00000516555 118 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HNF4AP41235 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 MEMO1P5-201ENST00000604810 406 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.75□□□□□ -1.65
HNF4AP41235 AC024933.1-201ENST00000608472 348 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AL645927.2-201ENST00000618350 349 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.75□□□□□ -1.65
HNF4AP41235 MIR6715B-201ENST00000637172 77 ntBASIC4.75□□□□□ -1.65
HNF4AP41235 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HNF4AP41235 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
HNF4AP41235 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HNF4AP41235 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HNF4AP41235 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.75□□□□□ -1.65
HNF4AP41235 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.74□□□□□ -1.65
HNF4AP41235 AL592182.3-201ENST00000642132 3304 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HNF4AP41235 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HNF4AP41235 HSPA8P19-201ENST00000505359 1517 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 RNA5SP123-201ENST00000363244 119 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 MIR105-2-201ENST00000385083 81 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 AL356057.1-202ENST00000402263 756 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 AL353692.2-201ENST00000407054 335 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 RN7SKP199-201ENST00000410325 305 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 VTA1P1-201ENST00000414044 866 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.74□□□□□ -1.65
HNF4AP41235 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms