Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DMAP28067 MTND4P10-201ENST00000446199 1363 ntBASIC3.85□□□□□ -1.79
HLA-DMAP28067 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DMAP28067 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DMAP28067 AC135352.1-201ENST00000506173 1418 ntBASIC3.85□□□□□ -1.79
HLA-DMAP28067 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HLA-DMAP28067 NCLP2-201ENST00000416078 1462 ntBASIC3.85□□□□□ -1.79
HLA-DMAP28067 LINC02471-203ENST00000641941 4752 ntBASIC3.85□□□□□ -1.79
HLA-DMAP28067 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DMAP28067 MIR423-201ENST00000362201 94 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 RNA5SP242-201ENST00000364171 118 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 OR3A2-201ENST00000408891 1076 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 NPM1P4-201ENST00000414095 812 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 RPL24P2-201ENST00000421023 475 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AC093698.1-201ENST00000423843 571 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 USP12PY-201ENST00000427677 1064 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 TPTE2P3-201ENST00000441562 1189 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 H2AFZP5-201ENST00000446960 382 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 AL606490.1-201ENST00000452266 765 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 ISCUP1-201ENST00000454451 448 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 UBA52P7-201ENST00000486088 380 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 RN7SKP70-201ENST00000516655 271 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DMAP28067 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 AC090181.2-201ENST00000602975 672 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AL354950.1-201ENST00000614150 568 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AC123768.4-201ENST00000616244 701 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 AC008115.4-201ENST00000619780 775 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DMAP28067 AP000843.1-201ENST00000624880 701 ntBASIC3.84□□□□□ -1.79
HLA-DMAP28067 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DMAP28067 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
HLA-DMAP28067 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.84□□□□□ -1.8
HLA-DMAP28067 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DMAP28067 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DMAP28067 XIAPP3-201ENST00000312918 795 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DMAP28067 RPL31P52-201ENST00000407532 367 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 SNORA74C-2-201ENST00000411179 201 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 OR2B7P-201ENST00000429302 934 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 YWHAQP9-201ENST00000445891 512 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 DDX39BP2-208ENST00000453923 258 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 RNU6-319P-201ENST00000516025 108 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 MIR3614-201ENST00000581261 86 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 MIR486-1-201ENST00000612171 68 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 AC019278.1-201ENST00000623516 479 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 AC007546.2-201ENST00000623996 360 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DMAP28067 AC139769.1-204ENST00000472297 1931 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 AC008725.1-201ENST00000605123 2263 ntBASIC3.83□□□□□ -1.8
HLA-DMAP28067 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DMAP28067 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DMAP28067 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DMAP28067 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC010928.1-201ENST00000592477 1447 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMAP28067 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMAP28067 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMAP28067 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMAP28067 MIR621-201ENST00000384919 96 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 Z98745.1-201ENST00000402553 494 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 RHEBP3-201ENST00000411920 351 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 AL365396.1-201ENST00000430854 671 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 NFYAP1-201ENST00000431953 972 ntBASIC3.82□□□□□ -1.8
HLA-DMAP28067 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMAP28067 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms