RNA–Protein interactions for RNA: ENST00000427677.1

USP12PY-201, Transcript of ubiquitin specific peptidase 12 pseudogene Y-linked, humanhuman

BASIC

Gene USP12PY, Length 1,064 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12PY-201ENST00000427677 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
USP12PY-201ENST00000427677 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
USP12PY-201ENST00000427677 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
USP12PY-201ENST00000427677 PHF23Q9BUL5 403 aaPredicted RBP25.31■■□□□ 1.64
USP12PY-201ENST00000427677 FOXD1Q16676 465 aa23.53■■□□□ 1.36
USP12PY-201ENST00000427677 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
USP12PY-201ENST00000427677 ADRA2BP18089 450 aa22.41■■□□□ 1.18
USP12PY-201ENST00000427677 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
USP12PY-201ENST00000427677 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
USP12PY-201ENST00000427677 MSH5O43196 834 aa21.9■■□□□ 1.1
USP12PY-201ENST00000427677 SCAF1Q9H7N4 1312 aaKnown RBP20.64■□□□□ 0.89
USP12PY-201ENST00000427677 PPP4R3CPQ6ZMV5 832 aa20.56■□□□□ 0.88
USP12PY-201ENST00000427677 MAPK8IP2Q13387 824 aaPredicted RBP20.38■□□□□ 0.85
USP12PY-201ENST00000427677 POTEDQ86YR6 584 aa20.29■□□□□ 0.84
USP12PY-201ENST00000427677 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
USP12PY-201ENST00000427677 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
USP12PY-201ENST00000427677 NCBP3Q53F19 620 aaKnown RBP20.03■□□□□ 0.8
USP12PY-201ENST00000427677 KCNA4P22459 653 aa19.77■□□□□ 0.76
USP12PY-201ENST00000427677 RNF216Q9NWF9 866 aaPredicted RBP19.73■□□□□ 0.75
USP12PY-201ENST00000427677 HOXD11P31277 338 aaPredicted RBP19.68■□□□□ 0.74
USP12PY-201ENST00000427677 NPM3O75607 178 aaKnown RBP19.64■□□□□ 0.73
USP12PY-201ENST00000427677 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
USP12PY-201ENST00000427677 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
USP12PY-201ENST00000427677 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
USP12PY-201ENST00000427677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
USP12PY-201ENST00000427677 RNF39Q9H2S5 420 aa18.67■□□□□ 0.58
USP12PY-201ENST00000427677 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
USP12PY-201ENST00000427677 C1QBPQ07021 282 aaKnown RBP18.48■□□□□ 0.55
USP12PY-201ENST00000427677 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
USP12PY-201ENST00000427677 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
USP12PY-201ENST00000427677 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.52
USP12PY-201ENST00000427677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
USP12PY-201ENST00000427677 MYCNP04198 464 aaPredicted RBP18.22■□□□□ 0.51
USP12PY-201ENST00000427677 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
USP12PY-201ENST00000427677 ZBTB22O15209 634 aa18.14■□□□□ 0.49
USP12PY-201ENST00000427677 APLP2Q06481 763 aa18.13■□□□□ 0.49
USP12PY-201ENST00000427677 SAMD1Q6SPF0 538 aaPredicted RBP18.12■□□□□ 0.49
USP12PY-201ENST00000427677 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
USP12PY-201ENST00000427677 CAPN15O75808 1086 aa17.99■□□□□ 0.47
USP12PY-201ENST00000427677 SPINK5Q9NQ38 1064 aaPredicted RBP17.97■□□□□ 0.47
USP12PY-201ENST00000427677 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
USP12PY-201ENST00000427677 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
USP12PY-201ENST00000427677 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
USP12PY-201ENST00000427677 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
USP12PY-201ENST00000427677 DSG3P32926 999 aa17.68■□□□□ 0.42
USP12PY-201ENST00000427677 ATF5Q9Y2D1 282 aaPredicted RBP17.64■□□□□ 0.41
USP12PY-201ENST00000427677 ABCB7O75027 752 aa17.59■□□□□ 0.41
USP12PY-201ENST00000427677 POLA2Q14181 598 aa17.46■□□□□ 0.39
USP12PY-201ENST00000427677 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
USP12PY-201ENST00000427677 FBLN2P98095 1184 aa17.07■□□□□ 0.32
USP12PY-201ENST00000427677 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
USP12PY-201ENST00000427677 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
USP12PY-201ENST00000427677 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
USP12PY-201ENST00000427677 SPDYE2BA6NHP3 402 aa16.71■□□□□ 0.27
USP12PY-201ENST00000427677 SPDYE6P0CI01 402 aa16.71■□□□□ 0.27
USP12PY-201ENST00000427677 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
USP12PY-201ENST00000427677 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
USP12PY-201ENST00000427677 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
USP12PY-201ENST00000427677 SSUH2Q9Y2M2 353 aa16.5■□□□□ 0.23
USP12PY-201ENST00000427677 SPDYE4A6NLX3 237 aa16.46■□□□□ 0.23
USP12PY-201ENST00000427677 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
USP12PY-201ENST00000427677 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
USP12PY-201ENST00000427677 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
USP12PY-201ENST00000427677 CHRDL2Q6WN34 429 aa16.29■□□□□ 0.2
USP12PY-201ENST00000427677 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
USP12PY-201ENST00000427677 FKBP8Q14318 412 aa16.23■□□□□ 0.19
USP12PY-201ENST00000427677 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
USP12PY-201ENST00000427677 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
USP12PY-201ENST00000427677 PROM2Q8N271 834 aa16.08■□□□□ 0.16
USP12PY-201ENST00000427677 POTEHQ6S545 545 aa16.05■□□□□ 0.16
USP12PY-201ENST00000427677 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
USP12PY-201ENST00000427677 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
USP12PY-201ENST00000427677 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
USP12PY-201ENST00000427677 PRKAR2AP13861 404 aaKnown RBP15.88■□□□□ 0.13
USP12PY-201ENST00000427677 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
USP12PY-201ENST00000427677 FBXO3Q9UK99 471 aa15.79■□□□□ 0.12
USP12PY-201ENST00000427677 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
USP12PY-201ENST00000427677 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
USP12PY-201ENST00000427677 MIER1Q8N108 512 aa15.65■□□□□ 0.1
USP12PY-201ENST00000427677 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
USP12PY-201ENST00000427677 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
USP12PY-201ENST00000427677 HAX1O00165 279 aa15.6■□□□□ 0.09
USP12PY-201ENST00000427677 NPM1P06748 294 aaKnown RBP eCLIP15.55■□□□□ 0.08
USP12PY-201ENST00000427677 VASPP50552 380 aaPredicted RBP15.52■□□□□ 0.08
USP12PY-201ENST00000427677 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
USP12PY-201ENST00000427677 MNX1P50219 401 aaPredicted RBP15.49■□□□□ 0.07
USP12PY-201ENST00000427677 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
USP12PY-201ENST00000427677 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
USP12PY-201ENST00000427677 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
USP12PY-201ENST00000427677 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
USP12PY-201ENST00000427677 EVX2Q03828 476 aa15.33■□□□□ 0.04
USP12PY-201ENST00000427677 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
USP12PY-201ENST00000427677 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
USP12PY-201ENST00000427677 IFNLR1Q8IU57 520 aaPredicted RBP15.24■□□□□ 0.03
USP12PY-201ENST00000427677 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
USP12PY-201ENST00000427677 NUBP1P53384 320 aa15.22■□□□□ 0.03
USP12PY-201ENST00000427677 RASEFQ8IZ41 740 aa15.21■□□□□ 0.03
USP12PY-201ENST00000427677 ZNF579Q8NAF0 562 aaKnown RBP15.2■□□□□ 0.02
USP12PY-201ENST00000427677 FAM212AQ96EL1 285 aa15.19■□□□□ 0.02
USP12PY-201ENST00000427677 SPOCK2Q92563 424 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms