RNA–Protein interactions for RNA: ENST00000544440.6

MYCBP2-211, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYCBP2, Length 14,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-211ENST00000544440 NISCHQ9Y2I1 1504 aa8.21□□□□□ -1.09
MYCBP2-211ENST00000544440 SHROOM4Q9ULL8 1493 aa7.15□□□□□ -1.26
MYCBP2-211ENST00000544440 SUPT5HO00267 1087 aaKnown RBP7.1□□□□□ -1.27
MYCBP2-211ENST00000544440 DCAF8L2P0C7V8 631 aa6.99□□□□□ -1.29
MYCBP2-211ENST00000544440 ZCCHC6Q5VYS8 1495 aaKnown RBP6.94□□□□□ -1.3
MYCBP2-211ENST00000544440 CHIC1Q5VXU3 224 aa6.91□□□□□ -1.3
MYCBP2-211ENST00000544440 CCDC180Q9P1Z9 1646 aa6.77□□□□□ -1.33
MYCBP2-211ENST00000544440 MYO15BQ96JP2 1530 aa6.75□□□□□ -1.33
MYCBP2-211ENST00000544440 HRCP23327 699 aa6.75□□□□□ -1.33
MYCBP2-211ENST00000544440 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
MYCBP2-211ENST00000544440 DCAF1Q9Y4B6 1507 aa6.7□□□□□ -1.34
MYCBP2-211ENST00000544440 LOC105371045A0A1W2PR82 267 aa6.68□□□□□ -1.34
MYCBP2-211ENST00000544440 MYT1Q01538 1121 aa6.66□□□□□ -1.34
MYCBP2-211ENST00000544440 PPARGC1BQ86YN6 1023 aaKnown RBP6.6□□□□□ -1.35
MYCBP2-211ENST00000544440 TRIM41Q8WV44 630 aa6.58□□□□□ -1.36
MYCBP2-211ENST00000544440 RSF1Q96T23 1441 aaPredicted RBP6.58□□□□□ -1.36
MYCBP2-211ENST00000544440 FAM9AQ8IZU1 332 aaPredicted RBP6.57□□□□□ -1.36
MYCBP2-211ENST00000544440 TRIM26Q12899 539 aaPredicted RBP6.55□□□□□ -1.36
MYCBP2-211ENST00000544440 PELP1Q8IZL8 1130 aaKnown RBP6.53□□□□□ -1.36
MYCBP2-211ENST00000544440 EHMT2Q96KQ7 1210 aa6.51□□□□□ -1.37
MYCBP2-211ENST00000544440 ABCC9O60706 1549 aa6.5□□□□□ -1.37
MYCBP2-211ENST00000544440 SCRIBQ14160 1630 aa6.47□□□□□ -1.37
MYCBP2-211ENST00000544440 CECR2Q9BXF3 1484 aa6.46□□□□□ -1.37
MYCBP2-211ENST00000544440 ZEB1P37275 1124 aaPredicted RBP6.45□□□□□ -1.38
MYCBP2-211ENST00000544440 RB1CC1Q8TDY2 1594 aa6.4□□□□□ -1.39
MYCBP2-211ENST00000544440 MROH2BQ7Z745 1585 aa6.39□□□□□ -1.39
MYCBP2-211ENST00000544440 NACADO15069 1562 aa6.37□□□□□ -1.39
MYCBP2-211ENST00000544440 TTBK1Q5TCY1 1321 aaPredicted RBP6.35□□□□□ -1.39
MYCBP2-211ENST00000544440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.31□□□□□ -1.4
MYCBP2-211ENST00000544440 CSRNP3Q8WYN3 585 aa6.3□□□□□ -1.4
MYCBP2-211ENST00000544440 CCER1Q8TC90 406 aaPredicted RBP6.3□□□□□ -1.4
MYCBP2-211ENST00000544440 BAZ1AQ9NRL2 1556 aaPredicted RBP6.29□□□□□ -1.4
MYCBP2-211ENST00000544440 UBTFP17480 764 aaKnown RBP6.28□□□□□ -1.4
MYCBP2-211ENST00000544440 PABPN1Q86U42 306 aaKnown RBP eCLIP6.27□□□□□ -1.41
MYCBP2-211ENST00000544440 CCDC88BA6NC98 1476 aa6.26□□□□□ -1.41
MYCBP2-211ENST00000544440 SOGA1O94964 1423 aa6.25□□□□□ -1.41
MYCBP2-211ENST00000544440 WIZO95785 1651 aa6.25□□□□□ -1.41
MYCBP2-211ENST00000544440 CEP162Q5TB80 1403 aa6.25□□□□□ -1.41
MYCBP2-211ENST00000544440 TNIKQ9UKE5 1360 aa6.24□□□□□ -1.41
MYCBP2-211ENST00000544440 SLC24A1O60721 1099 aa6.24□□□□□ -1.41
MYCBP2-211ENST00000544440 EEA1Q15075 1411 aa6.23□□□□□ -1.41
MYCBP2-211ENST00000544440 WRNQ14191 1432 aaPredicted RBP eCLIP6.23□□□□□ -1.41
MYCBP2-211ENST00000544440 SCAF1Q9H7N4 1312 aaKnown RBP6.22□□□□□ -1.41
MYCBP2-211ENST00000544440 TOP2AP11388 1531 aaKnown RBP6.21□□□□□ -1.42
MYCBP2-211ENST00000544440 ABCC8Q09428 1581 aa6.2□□□□□ -1.42
MYCBP2-211ENST00000544440 RUSC2Q8N2Y8 1516 aa6.19□□□□□ -1.42
MYCBP2-211ENST00000544440 HNRNPUL2Q1KMD3 747 aaKnown RBP6.19□□□□□ -1.42
MYCBP2-211ENST00000544440 EIF4G1Q04637 1599 aaKnown RBP6.18□□□□□ -1.42
MYCBP2-211ENST00000544440 DIEXFQ68CQ4 756 aaKnown RBP6.18□□□□□ -1.42
MYCBP2-211ENST00000544440 ACIN1Q9UKV3 1341 aaKnown RBP6.18□□□□□ -1.42
MYCBP2-211ENST00000544440 SMARCA2P51531 1590 aa6.17□□□□□ -1.42
MYCBP2-211ENST00000544440 ERICH6Q7L0X2 663 aa6.17□□□□□ -1.42
MYCBP2-211ENST00000544440 NEUROD1Q13562 356 aa6.17□□□□□ -1.42
MYCBP2-211ENST00000544440 APLP2Q06481 763 aa6.16□□□□□ -1.42
MYCBP2-211ENST00000544440 RANGAP1P46060 587 aaPredicted RBP6.16□□□□□ -1.42
MYCBP2-211ENST00000544440 SMARCA4P51532 1647 aa6.16□□□□□ -1.42
MYCBP2-211ENST00000544440 GOLGA3Q08378 1498 aa6.16□□□□□ -1.42
MYCBP2-211ENST00000544440 CENPBP07199 599 aaPredicted RBP6.15□□□□□ -1.42
MYCBP2-211ENST00000544440 CLIP1P30622 1438 aa6.15□□□□□ -1.43
MYCBP2-211ENST00000544440 ZNF316A6NFI3 1004 aaPredicted RBP6.14□□□□□ -1.43
MYCBP2-211ENST00000544440 CEP164Q9UPV0 1460 aa6.12□□□□□ -1.43
MYCBP2-211ENST00000544440 ATAD2BQ9ULI0 1458 aa6.12□□□□□ -1.43
MYCBP2-211ENST00000544440 VPS8Q8N3P4 1428 aa6.11□□□□□ -1.43
MYCBP2-211ENST00000544440 GTF3C3Q9Y5Q9 886 aa6.1□□□□□ -1.43
MYCBP2-211ENST00000544440 BAZ1BQ9UIG0 1483 aaKnown RBP6.08□□□□□ -1.44
MYCBP2-211ENST00000544440 BICRAQ9NZM4 1560 aa6.07□□□□□ -1.44
MYCBP2-211ENST00000544440 YTHDC1Q96MU7 727 aaKnown RBP6.07□□□□□ -1.44
MYCBP2-211ENST00000544440 RAPGEF2Q9Y4G8 1499 aa6.06□□□□□ -1.44
MYCBP2-211ENST00000544440 MIER1Q8N108 512 aa6.06□□□□□ -1.44
MYCBP2-211ENST00000544440 SYNJ1O43426 1573 aa6.05□□□□□ -1.44
MYCBP2-211ENST00000544440 PEG3Q9GZU2 1588 aa6.04□□□□□ -1.44
MYCBP2-211ENST00000544440 KANK4Q5T7N3 995 aaPredicted RBP6.03□□□□□ -1.44
MYCBP2-211ENST00000544440 PRXQ9BXM0 1461 aa6.01□□□□□ -1.45
MYCBP2-211ENST00000544440 MYT1LQ9UL68 1186 aa6□□□□□ -1.45
MYCBP2-211ENST00000544440 CLSPNQ9HAW4 1339 aa6□□□□□ -1.45
MYCBP2-211ENST00000544440 DHX57Q6P158 1386 aaKnown RBP6□□□□□ -1.45
MYCBP2-211ENST00000544440 KIF21BO75037 1637 aa6□□□□□ -1.45
MYCBP2-211ENST00000544440 ITGAEP38570 1179 aa6□□□□□ -1.45
MYCBP2-211ENST00000544440 KIF27Q86VH2 1401 aa6□□□□□ -1.45
MYCBP2-211ENST00000544440 NCAPD3P42695 1498 aa6□□□□□ -1.45
MYCBP2-211ENST00000544440 ARAP1Q96P48 1450 aa5.97□□□□□ -1.45
MYCBP2-211ENST00000544440 IGF1RP08069 1367 aa5.95□□□□□ -1.46
MYCBP2-211ENST00000544440 CCNB3Q8WWL7 1395 aa5.95□□□□□ -1.46
MYCBP2-211ENST00000544440 CFTRP13569 1480 aa5.94□□□□□ -1.46
MYCBP2-211ENST00000544440 ERICH3Q5RHP9 1530 aa5.94□□□□□ -1.46
MYCBP2-211ENST00000544440 CUX2O14529 1486 aa5.94□□□□□ -1.46
MYCBP2-211ENST00000544440 TOP2BQ02880 1626 aa5.93□□□□□ -1.46
MYCBP2-211ENST00000544440 CARMIL1Q5VZK9 1371 aa5.93□□□□□ -1.46
MYCBP2-211ENST00000544440 RRBP1Q9P2E9 1410 aaKnown RBP5.93□□□□□ -1.46
MYCBP2-211ENST00000544440 CUX1P39880 1505 aa5.92□□□□□ -1.46
MYCBP2-211ENST00000544440 P3H3Q8IVL6 736 aa5.92□□□□□ -1.46
MYCBP2-211ENST00000544440 CADPSQ9ULU8 1353 aa5.92□□□□□ -1.46
MYCBP2-211ENST00000544440 ARHGAP35Q9NRY4 1499 aa5.92□□□□□ -1.46
MYCBP2-211ENST00000544440 ATP1B4Q9UN42 357 aaPredicted RBP5.91□□□□□ -1.46
MYCBP2-211ENST00000544440 FAM50AQ14320 339 aaKnown RBP5.9□□□□□ -1.46
MYCBP2-211ENST00000544440 HMGXB3Q12766 1538 aa5.9□□□□□ -1.46
MYCBP2-211ENST00000544440 RAB3GAP2Q9H2M9 1393 aa5.9□□□□□ -1.46
MYCBP2-211ENST00000544440 SIN3AQ96ST3 1273 aa5.89□□□□□ -1.47
MYCBP2-211ENST00000544440 PLPPR3Q6T4P5 718 aa5.89□□□□□ -1.47
MYCBP2-211ENST00000544440 PHLDB1Q86UU1 1377 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms