Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC092953.2-201ENST00000608000 699 ntBASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 AC018645.2-201ENST00000609151 472 ntBASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 AC078880.5-201ENST00000617845 421 ntBASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 AC015914.2-201ENST00000618167 288 ntBASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 AP002967.1-201ENST00000624203 539 ntBASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAB40ALP0C0E4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 SOCS5P3-201ENST00000425115 1576 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC104260.2-201ENST00000623551 3497 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 RNU6-354P-201ENST00000383862 107 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 RNU6-317P-201ENST00000384031 107 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 RNU6-610P-201ENST00000384264 107 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 RPS3AP23-201ENST00000401762 784 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC016397.1-201ENST00000412463 242 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 HMGB3P31-201ENST00000413333 595 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC004074.1-201ENST00000421810 1063 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 SEC63P1-201ENST00000425785 1258 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AL031663.1-201ENST00000437445 219 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 CBX1P4-201ENST00000439415 457 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 NDUFA12P1-201ENST00000455914 406 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 RN7SL481P-201ENST00000477764 299 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 HMGB3P16-201ENST00000508037 287 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC138938.1-201ENST00000515431 782 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 RNU6-347P-201ENST00000516658 105 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC105031.1-201ENST00000518550 476 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AP001880.2-201ENST00000538233 448 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AP003717.3-201ENST00000544832 1180 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AL049830.4-201ENST00000555149 351 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC006272.2-201ENST00000594725 163 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 BNIP3P27-201ENST00000599991 412 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC019193.2-201ENST00000610012 634 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC007497.1-201ENST00000610421 561 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC008759.3-201ENST00000613300 508 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 AC005332.5-201ENST00000591222 2919 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 NCLP2-201ENST00000416078 1462 ntBASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB40ALP0C0E4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 RNF6P1-201ENST00000444889 1784 ntBASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 RNA5SP27-201ENST00000363839 119 ntBASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAB40ALP0C0E4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms