Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC090312.1-201ENST00000580637 348 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AL445363.3-201ENST00000623080 671 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 RPS4XP8-201ENST00000402039 771 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 RPS20P14-201ENST00000412545 360 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 MTCO1P39-201ENST00000426148 480 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 ISCUP1-201ENST00000454451 448 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AL353600.1-201ENST00000608148 251 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 BNIP3P41-202ENST00000616656 861 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC073063.1-201ENST00000434352 607 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AK4P6-201ENST00000505168 528 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 MIR8057-201ENST00000620957 69 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 DNAJA1P6-201ENST00000437347 354 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 RPL23AP52-201ENST00000439311 478 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 BX842559.2-201ENST00000451418 605 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 AC113192.3-201ENST00000529152 742 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 MIR6839-201ENST00000620425 113 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 ADAM5-202ENST00000399789 1942 ntBASIC1.72□□□□□ -2.13
MACF1Q9UPN3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
MACF1Q9UPN3 RPL7P58-201ENST00000402913 758 ntBASIC1.71□□□□□ -2.13
MACF1Q9UPN3 AC104333.2-201ENST00000422630 192 ntBASIC1.71□□□□□ -2.13
MACF1Q9UPN3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC1.71□□□□□ -2.13
MACF1Q9UPN3 SNORA71B-202ENST00000439232 272 ntBASIC1.71□□□□□ -2.13
MACF1Q9UPN3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC1.71□□□□□ -2.13
MACF1Q9UPN3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC1.71□□□□□ -2.13
MACF1Q9UPN3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.13
MACF1Q9UPN3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC1.71□□□□□ -2.13
MACF1Q9UPN3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.71□□□□□ -2.13
MACF1Q9UPN3 AC093010.3-201ENST00000570269 15214 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 U3.32-201ENST00000408116 212 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 BMS1P22-201ENST00000414726 313 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AC107083.1-201ENST00000439643 279 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 Z75741.1-201ENST00000446793 314 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 UBE2V2P4-201ENST00000447495 259 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 DEFB109D-201ENST00000529497 240 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AC103881.1-201ENST00000603476 538 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AC022336.2-201ENST00000568966 2538 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 LINC00561-201ENST00000565815 2738 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AC112198.2-201ENST00000426589 6996 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AL021877.2-201ENST00000624442 10684 ntBASIC1.71□□□□□ -2.14
MACF1Q9UPN3 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC1.71□□□□□ -2.14
MACF1Q9UPN3 BMS1P3-201ENST00000372011 932 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms