RNA–Protein interactions for RNA: ENST00000508823.1

LINC01017-201, Transcript of long intergenic non-protein coding RNA 1017, humanhuman

TSL 3 BASIC

Gene LINC01017, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01017-201ENST00000508823 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
LINC01017-201ENST00000508823 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
LINC01017-201ENST00000508823 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
LINC01017-201ENST00000508823 PHF23Q9BUL5 403 aaPredicted RBP24.63■■□□□ 1.53
LINC01017-201ENST00000508823 FOXD1Q16676 465 aa23.13■■□□□ 1.29
LINC01017-201ENST00000508823 PLPPR3Q6T4P5 718 aa22.62■■□□□ 1.21
LINC01017-201ENST00000508823 ADRA2BP18089 450 aa21.78■■□□□ 1.08
LINC01017-201ENST00000508823 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
LINC01017-201ENST00000508823 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
LINC01017-201ENST00000508823 MSH5O43196 834 aa21.68■■□□□ 1.06
LINC01017-201ENST00000508823 POTEDQ86YR6 584 aa20.54■□□□□ 0.88
LINC01017-201ENST00000508823 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
LINC01017-201ENST00000508823 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
LINC01017-201ENST00000508823 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
LINC01017-201ENST00000508823 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
LINC01017-201ENST00000508823 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
LINC01017-201ENST00000508823 NCBP3Q53F19 620 aaKnown RBP19.27■□□□□ 0.68
LINC01017-201ENST00000508823 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
LINC01017-201ENST00000508823 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
LINC01017-201ENST00000508823 DCAF8L1A6NGE4 600 aa19.04■□□□□ 0.64
LINC01017-201ENST00000508823 NPM3O75607 178 aaKnown RBP18.82■□□□□ 0.6
LINC01017-201ENST00000508823 KCNA4P22459 653 aa18.69■□□□□ 0.58
LINC01017-201ENST00000508823 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
LINC01017-201ENST00000508823 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
LINC01017-201ENST00000508823 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
LINC01017-201ENST00000508823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
LINC01017-201ENST00000508823 C1QBPQ07021 282 aaKnown RBP18.27■□□□□ 0.52
LINC01017-201ENST00000508823 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
LINC01017-201ENST00000508823 SLC4A2P04920 1241 aa17.85■□□□□ 0.45
LINC01017-201ENST00000508823 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
LINC01017-201ENST00000508823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
LINC01017-201ENST00000508823 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
LINC01017-201ENST00000508823 APLP2Q06481 763 aa17.67■□□□□ 0.42
LINC01017-201ENST00000508823 CAPN15O75808 1086 aa17.59■□□□□ 0.41
LINC01017-201ENST00000508823 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
LINC01017-201ENST00000508823 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
LINC01017-201ENST00000508823 MYCNP04198 464 aaPredicted RBP17.49■□□□□ 0.39
LINC01017-201ENST00000508823 FOXD4L1Q9NU39 408 aa17.44■□□□□ 0.38
LINC01017-201ENST00000508823 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
LINC01017-201ENST00000508823 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
LINC01017-201ENST00000508823 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
LINC01017-201ENST00000508823 DSG3P32926 999 aa17.35■□□□□ 0.37
LINC01017-201ENST00000508823 ABCB7O75027 752 aa17.14■□□□□ 0.33
LINC01017-201ENST00000508823 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
LINC01017-201ENST00000508823 ZBTB22O15209 634 aa17.11■□□□□ 0.33
LINC01017-201ENST00000508823 POLA2Q14181 598 aa16.94■□□□□ 0.3
LINC01017-201ENST00000508823 ATXN8OSP0DMR3 200 aa16.93■□□□□ 0.3
LINC01017-201ENST00000508823 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
LINC01017-201ENST00000508823 ZBTB12Q9Y330 459 aaPredicted RBP16.76■□□□□ 0.27
LINC01017-201ENST00000508823 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
LINC01017-201ENST00000508823 FBLN2P98095 1184 aa16.45■□□□□ 0.22
LINC01017-201ENST00000508823 OSCARQ8IYS5 282 aa16.36■□□□□ 0.21
LINC01017-201ENST00000508823 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
LINC01017-201ENST00000508823 SPDYE2BA6NHP3 402 aa16.2■□□□□ 0.18
LINC01017-201ENST00000508823 SPDYE6P0CI01 402 aa16.2■□□□□ 0.18
LINC01017-201ENST00000508823 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
LINC01017-201ENST00000508823 POTEHQ6S545 545 aa16.2■□□□□ 0.18
LINC01017-201ENST00000508823 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
LINC01017-201ENST00000508823 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
LINC01017-201ENST00000508823 REM2Q8IYK8 340 aaPredicted RBP16.11■□□□□ 0.17
LINC01017-201ENST00000508823 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
LINC01017-201ENST00000508823 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
LINC01017-201ENST00000508823 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
LINC01017-201ENST00000508823 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
LINC01017-201ENST00000508823 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
LINC01017-201ENST00000508823 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC01017-201ENST00000508823 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
LINC01017-201ENST00000508823 FXR2P51116 673 aaKnown RBP eCLIP15.72■□□□□ 0.11
LINC01017-201ENST00000508823 SPDYE4A6NLX3 237 aa15.66■□□□□ 0.1
LINC01017-201ENST00000508823 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
LINC01017-201ENST00000508823 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
LINC01017-201ENST00000508823 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
LINC01017-201ENST00000508823 HAX1O00165 279 aa15.47■□□□□ 0.07
LINC01017-201ENST00000508823 FKBP8Q14318 412 aa15.39■□□□□ 0.05
LINC01017-201ENST00000508823 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
LINC01017-201ENST00000508823 SP7Q8TDD2 431 aaPredicted RBP15.34■□□□□ 0.05
LINC01017-201ENST00000508823 PROM2Q8N271 834 aa15.25■□□□□ 0.03
LINC01017-201ENST00000508823 FARP1Q9Y4F1 1045 aaPredicted RBP15.23■□□□□ 0.03
LINC01017-201ENST00000508823 C19orf67A6NJJ6 358 aa15.21■□□□□ 0.03
LINC01017-201ENST00000508823 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
LINC01017-201ENST00000508823 EVX2Q03828 476 aa15.12■□□□□ 0.01
LINC01017-201ENST00000508823 CD44P16070 742 aaKnown RBP15.08■□□□□ 0
LINC01017-201ENST00000508823 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
LINC01017-201ENST00000508823 PLEKHG5O94827 1062 aa15.05■□□□□ -0
LINC01017-201ENST00000508823 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
LINC01017-201ENST00000508823 CLCN6P51797 869 aa14.95□□□□□ -0.02
LINC01017-201ENST00000508823 MIER1Q8N108 512 aa14.94□□□□□ -0.02
LINC01017-201ENST00000508823 GABBR2O75899 941 aa14.91□□□□□ -0.02
LINC01017-201ENST00000508823 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
LINC01017-201ENST00000508823 MNX1P50219 401 aaPredicted RBP14.9□□□□□ -0.02
LINC01017-201ENST00000508823 PLCD3Q8N3E9 789 aa14.89□□□□□ -0.03
LINC01017-201ENST00000508823 FBXO3Q9UK99 471 aa14.88□□□□□ -0.03
LINC01017-201ENST00000508823 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
LINC01017-201ENST00000508823 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
LINC01017-201ENST00000508823 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
LINC01017-201ENST00000508823 DCBLD2Q96PD2 775 aa14.67□□□□□ -0.06
LINC01017-201ENST00000508823 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
LINC01017-201ENST00000508823 AMER1Q5JTC6 1135 aaPredicted RBP14.65□□□□□ -0.06
LINC01017-201ENST00000508823 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
LINC01017-201ENST00000508823 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms