Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AL049641.1-201ENST00000441055 1948 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RNU6-238P-201ENST00000363313 106 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RNU4-1-201ENST00000363925 141 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 MIR621-201ENST00000384919 96 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RPS6P23-201ENST00000413224 722 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 FAM183DP-201ENST00000421987 399 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC079781.2-201ENST00000446424 169 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 GMFBP1-201ENST00000467831 427 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 TRBV1-201ENST00000476502 284 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RPL21P99-201ENST00000480369 423 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RPL21P42-201ENST00000488408 464 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RN7SL518P-201ENST00000491887 280 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 TECRP2-201ENST00000503270 928 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RPL7L1P7-201ENST00000509986 724 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC123904.2-201ENST00000548059 300 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC090502.2-201ENST00000549267 280 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC007375.1-201ENST00000554513 578 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 ULK4P1-202ENST00000565174 503 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC023827.2-201ENST00000566880 1061 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC098848.2-201ENST00000588023 330 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC009779.8-202ENST00000607990 932 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AC135068.11-201ENST00000636378 921 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AP003119.3-201ENST00000566747 4192 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AF287957.1-201ENST00000607368 1595 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AL355974.1-201ENST00000618896 1708 ntBASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RNA5SP429-201ENST00000363688 109 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RNU6-1188P-201ENST00000363795 107 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RNU12-2P-201ENST00000364789 156 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RNU6-26P-201ENST00000383985 107 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 Y_RNA.552-201ENST00000384665 112 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RNU1-149P-201ENST00000390870 161 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RPL31P52-201ENST00000407532 367 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RN7SKP158-201ENST00000410453 326 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 HNRNPDLP1-201ENST00000412834 550 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RPL7P10-201ENST00000417407 739 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 SDAD1P3-201ENST00000427380 333 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 FABP7P2-201ENST00000429946 379 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 SRP68P2-201ENST00000456184 254 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 BX323845.2-201ENST00000458382 234 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AC025271.1-201ENST00000485045 429 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RPS10P20-201ENST00000494130 463 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RPL39P5-202ENST00000512505 151 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 Y_RNA.668-201ENST00000516233 93 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 RNU6-1220P-201ENST00000517126 108 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 HIGD1AP6-201ENST00000521833 279 ntBASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.4□□□□□ -1.22
SCUBE3Q8IX30 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms