Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 SNORA70F-201ENST00000384142 135 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 MIR129-1-201ENST00000384972 72 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 U3.22-201ENST00000391120 215 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 TAF9BP2-201ENST00000400856 499 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.95□□□□□ -1.62
LIMK1P53667 ARL2BPP3-201ENST00000421226 480 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 NPM1P24-201ENST00000428039 894 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.95□□□□□ -1.62
LIMK1P53667 NRBF2P3-201ENST00000432731 865 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.95□□□□□ -1.62
LIMK1P53667 AC044797.1-201ENST00000445744 679 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 AC245028.2-201ENST00000458673 253 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.95□□□□□ -1.62
LIMK1P53667 IGBP1P4-201ENST00000503202 879 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 MRPS33P2-201ENST00000507850 322 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.95□□□□□ -1.62
LIMK1P53667 NDUFB4P12-201ENST00000513465 390 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 RNA5SP464-201ENST00000516251 108 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 SCARNA20.4-201ENST00000516969 131 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.95□□□□□ -1.62
LIMK1P53667 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.95□□□□□ -1.62
LIMK1P53667 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.95□□□□□ -1.62
LIMK1P53667 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 AC005191.1-201ENST00000603950 358 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 AC016957.2-201ENST00000616998 848 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 LINC00901.1-201ENST00000617252 152 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 AC090617.9-201ENST00000623751 147 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LIMK1P53667 AC100778.3-201ENST00000580060 1750 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
LIMK1P53667 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LIMK1P53667 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 AC139713.2-214ENST00000642059 1811 ntBASIC4.95□□□□□ -1.62
LIMK1P53667 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMK1P53667 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 AL512283.1-201ENST00000606756 1384 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 ASNSP1-204ENST00000641977 1664 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
LIMK1P53667 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LIMK1P53667 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.94□□□□□ -1.62
LIMK1P53667 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 HSPD1P16-201ENST00000402302 394 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 RNU4-25P-201ENST00000410569 230 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 RPL23AP1-201ENST00000428990 471 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 RPL19P16-201ENST00000433839 588 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.94□□□□□ -1.62
LIMK1P53667 SLC25A18P1-201ENST00000449385 454 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 AC010683.1-201ENST00000473673 378 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 AC107398.1-201ENST00000486904 505 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.94□□□□□ -1.62
LIMK1P53667 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.94□□□□□ -1.62
LIMK1P53667 AC026402.1-201ENST00000513642 170 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 RN7SKP141-201ENST00000516167 338 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 SOX5P1-201ENST00000524155 1127 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.94□□□□□ -1.62
LIMK1P53667 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 AC084824.1-201ENST00000550917 1005 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 GLRXP2-201ENST00000555594 321 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.94□□□□□ -1.62
LIMK1P53667 NPM1P47-201ENST00000560843 856 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 CBX3P2-202ENST00000583365 535 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.94□□□□□ -1.62
LIMK1P53667 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.94□□□□□ -1.62
LIMK1P53667 AL023881.1-201ENST00000621088 301 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 uc_338.7-201ENST00000621834 124 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.94□□□□□ -1.62
LIMK1P53667 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.94□□□□□ -1.62
LIMK1P53667 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.94□□□□□ -1.62
LIMK1P53667 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.94□□□□□ -1.62
LIMK1P53667 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
LIMK1P53667 ZNF652P1-201ENST00000442420 1309 ntBASIC4.94□□□□□ -1.62
LIMK1P53667 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIMK1P53667 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIMK1P53667 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms