Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 SETP1-201ENST00000556014 845 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 MIR4760-201ENST00000585040 80 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 IMMP1LP3-201ENST00000604197 224 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC034229.4-201ENST00000607861 441 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC013468.1-201ENST00000608680 598 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC234782.5-201ENST00000617723 324 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC011493.1-201ENST00000596753 1632 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 U3.2-201ENST00000362981 210 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 RNU4-44P-201ENST00000363050 141 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 RN7SKP162-201ENST00000363605 345 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 U3.25-201ENST00000391209 220 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AL512430.2-201ENST00000406786 339 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 MTCO2P8-201ENST00000412213 658 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 CHEK2P5-201ENST00000423877 246 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 MTCO2P23-201ENST00000425216 680 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 GTF3AP5-201ENST00000442645 697 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 KNOP1P3-201ENST00000446933 426 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 PTMAP3-201ENST00000447474 330 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 RN7SL174P-201ENST00000475578 289 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC024558.1-201ENST00000505008 528 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC091163.3-201ENST00000518269 1144 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC104417.1-201ENST00000523974 751 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 MTCYBP23-201ENST00000558717 1102 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AL049838.1-201ENST00000563647 981 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC116553.2-201ENST00000564203 463 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 MIR4310-201ENST00000582950 57 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC109454.4-201ENST00000623411 649 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AC068787.1-201ENST00000623908 691 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AP003072.4-201ENST00000624580 310 ntBASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
BRF2Q9HAW0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 SCARNA15-201ENST00000607520 4325 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRF2Q9HAW0 BMS1P3-201ENST00000372011 932 ntBASIC4.87□□□□□ -1.63
BRF2Q9HAW0 ZNF602P-201ENST00000405929 924 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms