RNA–Protein interactions for RNA: ENST00000563647.1

AL049838.1-201, humanhuman

BASIC

Gene AL049838.1, Length 981 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049838.1-201ENST00000563647 AEBP2Q6ZN18 517 aaPredicted RBP28.86■■■□□ 2.21
AL049838.1-201ENST00000563647 CHIC1Q5VXU3 224 aa28.12■■■□□ 2.09
AL049838.1-201ENST00000563647 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
AL049838.1-201ENST00000563647 SENP3Q9H4L4 574 aaPredicted RBP24.64■■□□□ 1.54
AL049838.1-201ENST00000563647 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
AL049838.1-201ENST00000563647 FOXD1Q16676 465 aa22.8■■□□□ 1.24
AL049838.1-201ENST00000563647 ADRA2BP18089 450 aa21.77■■□□□ 1.08
AL049838.1-201ENST00000563647 PPP6R1Q9UPN7 881 aa21.77■■□□□ 1.08
AL049838.1-201ENST00000563647 PIAS4Q8N2W9 510 aaPredicted RBP21.52■■□□□ 1.04
AL049838.1-201ENST00000563647 MSH5O43196 834 aa21.19■□□□□ 0.98
AL049838.1-201ENST00000563647 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
AL049838.1-201ENST00000563647 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
AL049838.1-201ENST00000563647 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
AL049838.1-201ENST00000563647 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
AL049838.1-201ENST00000563647 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
AL049838.1-201ENST00000563647 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
AL049838.1-201ENST00000563647 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
AL049838.1-201ENST00000563647 KCNA4P22459 653 aa19.38■□□□□ 0.69
AL049838.1-201ENST00000563647 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
AL049838.1-201ENST00000563647 NPM3O75607 178 aaKnown RBP19.18■□□□□ 0.66
AL049838.1-201ENST00000563647 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
AL049838.1-201ENST00000563647 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
AL049838.1-201ENST00000563647 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
AL049838.1-201ENST00000563647 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
AL049838.1-201ENST00000563647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.52
AL049838.1-201ENST00000563647 SLC4A2P04920 1241 aa18.12■□□□□ 0.49
AL049838.1-201ENST00000563647 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
AL049838.1-201ENST00000563647 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
AL049838.1-201ENST00000563647 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
AL049838.1-201ENST00000563647 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
AL049838.1-201ENST00000563647 ZBTB22O15209 634 aa17.79■□□□□ 0.44
AL049838.1-201ENST00000563647 MYCNP04198 464 aaPredicted RBP17.79■□□□□ 0.44
AL049838.1-201ENST00000563647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
AL049838.1-201ENST00000563647 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
AL049838.1-201ENST00000563647 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
AL049838.1-201ENST00000563647 CACNB1Q02641 598 aaPredicted RBP17.74■□□□□ 0.43
AL049838.1-201ENST00000563647 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
AL049838.1-201ENST00000563647 APLP2Q06481 763 aa17.64■□□□□ 0.41
AL049838.1-201ENST00000563647 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
AL049838.1-201ENST00000563647 CAPN15O75808 1086 aa17.43■□□□□ 0.38
AL049838.1-201ENST00000563647 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
AL049838.1-201ENST00000563647 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
AL049838.1-201ENST00000563647 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
AL049838.1-201ENST00000563647 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
AL049838.1-201ENST00000563647 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
AL049838.1-201ENST00000563647 DSG3P32926 999 aa17.14■□□□□ 0.33
AL049838.1-201ENST00000563647 ABCB7O75027 752 aa17.05■□□□□ 0.32
AL049838.1-201ENST00000563647 POLA2Q14181 598 aa16.97■□□□□ 0.31
AL049838.1-201ENST00000563647 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
AL049838.1-201ENST00000563647 FBLN2P98095 1184 aa16.64■□□□□ 0.25
AL049838.1-201ENST00000563647 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
AL049838.1-201ENST00000563647 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
AL049838.1-201ENST00000563647 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
AL049838.1-201ENST00000563647 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
AL049838.1-201ENST00000563647 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
AL049838.1-201ENST00000563647 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
AL049838.1-201ENST00000563647 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
AL049838.1-201ENST00000563647 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
AL049838.1-201ENST00000563647 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
AL049838.1-201ENST00000563647 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
AL049838.1-201ENST00000563647 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
AL049838.1-201ENST00000563647 FKBP8Q14318 412 aa15.96■□□□□ 0.15
AL049838.1-201ENST00000563647 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
AL049838.1-201ENST00000563647 SPDYE1Q8NFV5 336 aaPredicted RBP15.84■□□□□ 0.13
AL049838.1-201ENST00000563647 PITPNM1O00562 1244 aa15.79■□□□□ 0.12
AL049838.1-201ENST00000563647 PROM2Q8N271 834 aa15.79■□□□□ 0.12
AL049838.1-201ENST00000563647 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
AL049838.1-201ENST00000563647 CLEC11AQ9Y240 323 aa15.74■□□□□ 0.11
AL049838.1-201ENST00000563647 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
AL049838.1-201ENST00000563647 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
AL049838.1-201ENST00000563647 FXR2P51116 673 aaKnown RBP eCLIP15.52■□□□□ 0.08
AL049838.1-201ENST00000563647 FBXO3Q9UK99 471 aa15.51■□□□□ 0.07
AL049838.1-201ENST00000563647 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
AL049838.1-201ENST00000563647 POTEHQ6S545 545 aa15.41■□□□□ 0.06
AL049838.1-201ENST00000563647 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
AL049838.1-201ENST00000563647 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
AL049838.1-201ENST00000563647 PLEKHG5O94827 1062 aa15.32■□□□□ 0.04
AL049838.1-201ENST00000563647 CREBZFQ9NS37 354 aa15.31■□□□□ 0.04
AL049838.1-201ENST00000563647 MIER1Q8N108 512 aa15.28■□□□□ 0.04
AL049838.1-201ENST00000563647 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
AL049838.1-201ENST00000563647 VASPP50552 380 aaPredicted RBP15.24■□□□□ 0.03
AL049838.1-201ENST00000563647 FARP1Q9Y4F1 1045 aaPredicted RBP15.21■□□□□ 0.03
AL049838.1-201ENST00000563647 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
AL049838.1-201ENST00000563647 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
AL049838.1-201ENST00000563647 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
AL049838.1-201ENST00000563647 HAX1O00165 279 aa15.06■□□□□ 0
AL049838.1-201ENST00000563647 KLHL34Q8N239 644 aa15.04■□□□□ -0
AL049838.1-201ENST00000563647 C19orf67A6NJJ6 358 aa15□□□□□ -0.01
AL049838.1-201ENST00000563647 CD44P16070 742 aaKnown RBP14.97□□□□□ -0.01
AL049838.1-201ENST00000563647 IFNLR1Q8IU57 520 aaPredicted RBP14.97□□□□□ -0.01
AL049838.1-201ENST00000563647 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
AL049838.1-201ENST00000563647 SPOCK2Q92563 424 aa14.89□□□□□ -0.03
AL049838.1-201ENST00000563647 NUBP1P53384 320 aa14.88□□□□□ -0.03
AL049838.1-201ENST00000563647 ZRANB1Q9UGI0 708 aa14.85□□□□□ -0.03
AL049838.1-201ENST00000563647 RASEFQ8IZ41 740 aa14.84□□□□□ -0.03
AL049838.1-201ENST00000563647 FAM212AQ96EL1 285 aa14.84□□□□□ -0.03
AL049838.1-201ENST00000563647 EVX2Q03828 476 aa14.82□□□□□ -0.04
AL049838.1-201ENST00000563647 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
AL049838.1-201ENST00000563647 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.05
AL049838.1-201ENST00000563647 SP7Q8TDD2 431 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms