Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MIR4721-201ENST00000577590 89 ntBASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 AL121928.1-201ENST00000608017 521 ntBASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 Metazoa_SRP.88-201ENST00000615890 269 ntBASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 AC005088.1-201ENST00000621922 274 ntBASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 CR392039.1-201ENST00000623217 204 ntBASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 PPP1R3C-201ENST00000238994 2524 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 HLA-V-203ENST00000457107 4814 ntBASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 HPCAL4-202ENST00000612703 4436 ntTSL 2 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 AC132154.1-201ENST00000623248 2134 ntBASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 DEPDC5-222ENST00000535622 5155 ntTSL 2 BASIC5.09□□□□□ -1.59
KRTAP3-3Q9BYR6 SH3TC2-215ENST00000515425 4059 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 CPA6-201ENST00000297770 2002 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 NCMAP-201ENST00000374392 3953 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 TNIK-214ENST00000488470 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 HAL-203ENST00000541929 3846 ntTSL 2 BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 DLST-202ENST00000334220 2838 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 CAMSAP1-201ENST00000312405 6054 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
KRTAP3-3Q9BYR6 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 MCTP2-203ENST00000451018 2472 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AF111167.2-201ENST00000560419 4059 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 PAQR5-202ENST00000395407 5337 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 NUTM1-201ENST00000333756 3795 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 THNSL2-201ENST00000324166 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 VASH2-206ENST00000366968 4224 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 PNPLA8-201ENST00000257694 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 ACSL6-212ENST00000431707 2060 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 CSF2RB-201ENST00000262825 4087 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 IKBKB-202ENST00000416505 4036 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 SPOCD1-202ENST00000360482 3960 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 BTN2A2-201ENST00000352867 3241 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF137P-201ENST00000456718 1920 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 MRS2-201ENST00000274747 3821 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 RNU6-457P-201ENST00000363999 107 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 RNU6-1305P-201ENST00000364353 104 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 S100A2-201ENST00000368707 556 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 MIR636-201ENST00000384825 99 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 MIR518D-201ENST00000385014 87 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 OTX2-202ENST00000408990 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 RNU2-40P-201ENST00000410833 196 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 U2AF1L4-203ENST00000412391 904 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 RPL35AP3-201ENST00000414680 288 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AL356867.1-201ENST00000429623 299 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 PGAM3P-201ENST00000437662 427 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 NME6-211ENST00000447314 621 ntTSL 3 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 RN7SL833P-201ENST00000498758 284 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AC096725.1-201ENST00000514266 313 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 SNORA74.2-201ENST00000516496 180 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 SNHG14-211ENST00000547292 626 ntTSL 5 BASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AC119044.1-201ENST00000553227 404 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 AC022523.2-201ENST00000561045 150 ntBASIC5.08□□□□□ -1.6
KRTAP3-3Q9BYR6 DNM1P32-201ENST00000566124 544 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms