Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HPS4Q9NQG7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HPS4Q9NQG7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HPS4Q9NQG7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HPS4Q9NQG7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
HPS4Q9NQG7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.9□□□□□ -1.63
HPS4Q9NQG7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC126323.6-202ENST00000568092 3511 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 RNA5SP447-201ENST00000363749 119 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 RNU6-152P-201ENST00000384037 107 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC093719.1-202ENST00000392735 373 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 ST13P16-201ENST00000401760 781 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 SNORA11-201ENST00000408789 128 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 MTCYBP7-201ENST00000419540 1134 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 RSL24D1P6-201ENST00000426934 401 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AL606490.8-201ENST00000441624 319 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 MRPL35P2-201ENST00000448009 511 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 RN7SL517P-201ENST00000462240 305 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC025674.1-201ENST00000507074 324 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 IGKV2D-10-201ENST00000520194 281 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC068831.4-201ENST00000556118 109 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 RN7SL652P-201ENST00000577769 300 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 AL590392.1-201ENST00000604960 446 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
HPS4Q9NQG7 VN2R3P-201ENST00000422626 1412 ntBASIC4.89□□□□□ -1.63
HPS4Q9NQG7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 SNORD65-201ENST00000391079 73 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AL049693.1-201ENST00000402760 611 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AL158073.1-201ENST00000426848 1104 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 RPL12P28-201ENST00000430852 489 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 MTCO1P57-201ENST00000432182 261 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 MTND2P28-201ENST00000457540 1044 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 RN7SKP122-201ENST00000515923 296 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 RNU6-709P-201ENST00000517257 104 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 MTCYBP19-201ENST00000517463 1124 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AC109635.6-201ENST00000525487 1113 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 SNX6P1-201ENST00000601728 1224 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 OR52H1-202ENST00000641796 1061 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 AC009643.2-201ENST00000603543 1448 ntBASIC4.88□□□□□ -1.63
HPS4Q9NQG7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS4Q9NQG7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 AC009229.4-201ENST00000623854 1947 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 RNU4-7P-201ENST00000364758 141 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 AL136131.1-201ENST00000406079 803 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 RNU4-25P-201ENST00000410569 230 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 OR51B3P-201ENST00000412287 913 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 AC140479.3-201ENST00000418944 1126 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 UQCRBP1-201ENST00000421129 336 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 AC234779.1-201ENST00000425910 285 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 RPS26P47-201ENST00000427219 348 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.87□□□□□ -1.63
HPS4Q9NQG7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS4Q9NQG7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms