RNA–Protein interactions for RNA: ENST00000395035.3

CDKL4-202, Transcript of cyclin dependent kinase like 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKL4, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4-202ENST00000395035 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
CDKL4-202ENST00000395035 CHIC1Q5VXU3 224 aa25.87■■□□□ 1.73
CDKL4-202ENST00000395035 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
CDKL4-202ENST00000395035 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
CDKL4-202ENST00000395035 FOXD1Q16676 465 aa22.23■■□□□ 1.15
CDKL4-202ENST00000395035 POTEDQ86YR6 584 aa21.82■■□□□ 1.08
CDKL4-202ENST00000395035 MSH5O43196 834 aa21.07■□□□□ 0.96
CDKL4-202ENST00000395035 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.89
CDKL4-202ENST00000395035 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
CDKL4-202ENST00000395035 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
CDKL4-202ENST00000395035 ADRA2BP18089 450 aa20.11■□□□□ 0.81
CDKL4-202ENST00000395035 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
CDKL4-202ENST00000395035 MAPK8IP2Q13387 824 aaPredicted RBP18.7■□□□□ 0.58
CDKL4-202ENST00000395035 CACNB1Q02641 598 aaPredicted RBP18.51■□□□□ 0.55
CDKL4-202ENST00000395035 SCAF1Q9H7N4 1312 aaKnown RBP18.39■□□□□ 0.53
CDKL4-202ENST00000395035 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
CDKL4-202ENST00000395035 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
CDKL4-202ENST00000395035 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
CDKL4-202ENST00000395035 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
CDKL4-202ENST00000395035 PPP4R3CPQ6ZMV5 832 aa17.55■□□□□ 0.4
CDKL4-202ENST00000395035 RNF216Q9NWF9 866 aaPredicted RBP17.42■□□□□ 0.38
CDKL4-202ENST00000395035 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
CDKL4-202ENST00000395035 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
CDKL4-202ENST00000395035 POTEHQ6S545 545 aa16.95■□□□□ 0.3
CDKL4-202ENST00000395035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDKL4-202ENST00000395035 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
CDKL4-202ENST00000395035 DSG3P32926 999 aa16.55■□□□□ 0.24
CDKL4-202ENST00000395035 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
CDKL4-202ENST00000395035 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
CDKL4-202ENST00000395035 CAPN15O75808 1086 aa16.43■□□□□ 0.22
CDKL4-202ENST00000395035 NPM3O75607 178 aaKnown RBP16.42■□□□□ 0.22
CDKL4-202ENST00000395035 ABCB7O75027 752 aa16■□□□□ 0.15
CDKL4-202ENST00000395035 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
CDKL4-202ENST00000395035 KCNA4P22459 653 aa15.95■□□□□ 0.14
CDKL4-202ENST00000395035 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
CDKL4-202ENST00000395035 APLP2Q06481 763 aa15.9■□□□□ 0.14
CDKL4-202ENST00000395035 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
CDKL4-202ENST00000395035 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
CDKL4-202ENST00000395035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
CDKL4-202ENST00000395035 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
CDKL4-202ENST00000395035 CHRDL2Q6WN34 429 aa15.73■□□□□ 0.11
CDKL4-202ENST00000395035 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
CDKL4-202ENST00000395035 SP7Q8TDD2 431 aaPredicted RBP15.55■□□□□ 0.08
CDKL4-202ENST00000395035 POLA2Q14181 598 aa15.41■□□□□ 0.06
CDKL4-202ENST00000395035 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
CDKL4-202ENST00000395035 PIP4P2Q8N4L2 257 aa15.21■□□□□ 0.03
CDKL4-202ENST00000395035 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
CDKL4-202ENST00000395035 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
CDKL4-202ENST00000395035 HAX1O00165 279 aa15.11■□□□□ 0.01
CDKL4-202ENST00000395035 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
CDKL4-202ENST00000395035 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
CDKL4-202ENST00000395035 FXR2P51116 673 aaKnown RBP eCLIP15.01□□□□□ -0.01
CDKL4-202ENST00000395035 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
CDKL4-202ENST00000395035 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
CDKL4-202ENST00000395035 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
CDKL4-202ENST00000395035 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
CDKL4-202ENST00000395035 EVX2Q03828 476 aa14.9□□□□□ -0.02
CDKL4-202ENST00000395035 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
CDKL4-202ENST00000395035 ZBTB22O15209 634 aa14.68□□□□□ -0.06
CDKL4-202ENST00000395035 PRKAR2AP13861 404 aaKnown RBP14.58□□□□□ -0.08
CDKL4-202ENST00000395035 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
CDKL4-202ENST00000395035 LHX8Q68G74 356 aa14.56□□□□□ -0.08
CDKL4-202ENST00000395035 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
CDKL4-202ENST00000395035 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
CDKL4-202ENST00000395035 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
CDKL4-202ENST00000395035 GABBR2O75899 941 aa14.51□□□□□ -0.09
CDKL4-202ENST00000395035 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
CDKL4-202ENST00000395035 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
CDKL4-202ENST00000395035 CLEC11AQ9Y240 323 aa14.44□□□□□ -0.1
CDKL4-202ENST00000395035 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
CDKL4-202ENST00000395035 FBLN2P98095 1184 aa14.35□□□□□ -0.11
CDKL4-202ENST00000395035 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
CDKL4-202ENST00000395035 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
CDKL4-202ENST00000395035 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
CDKL4-202ENST00000395035 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
CDKL4-202ENST00000395035 PLSCR2Q9NRY7 297 aa14.22□□□□□ -0.13
CDKL4-202ENST00000395035 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
CDKL4-202ENST00000395035 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
CDKL4-202ENST00000395035 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
CDKL4-202ENST00000395035 CLCN6P51797 869 aa14.03□□□□□ -0.16
CDKL4-202ENST00000395035 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
CDKL4-202ENST00000395035 FARP1Q9Y4F1 1045 aaPredicted RBP13.98□□□□□ -0.17
CDKL4-202ENST00000395035 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
CDKL4-202ENST00000395035 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
CDKL4-202ENST00000395035 OTUD5Q96G74 571 aa13.82□□□□□ -0.2
CDKL4-202ENST00000395035 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
CDKL4-202ENST00000395035 POTEMA6NI47 508 aa13.75□□□□□ -0.21
CDKL4-202ENST00000395035 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
CDKL4-202ENST00000395035 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
CDKL4-202ENST00000395035 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
CDKL4-202ENST00000395035 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
CDKL4-202ENST00000395035 PCDH10Q9P2E7 1040 aa13.57□□□□□ -0.24
CDKL4-202ENST00000395035 PELP1Q8IZL8 1130 aaKnown RBP13.52□□□□□ -0.25
CDKL4-202ENST00000395035 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
CDKL4-202ENST00000395035 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
CDKL4-202ENST00000395035 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
CDKL4-202ENST00000395035 POTEJP0CG39 1038 aa13.42□□□□□ -0.26
CDKL4-202ENST00000395035 METRNQ9UJH8 293 aa13.41□□□□□ -0.26
CDKL4-202ENST00000395035 LCE2DQ5TA82 110 aaPredicted RBP13.39□□□□□ -0.27
CDKL4-202ENST00000395035 ASTLQ6HA08 431 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms