Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HMGB1P38-201ENST00000490557 577 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 UBE2V1P12-201ENST00000503954 474 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.89□□□□□ -1.63
CLCNKAP51800 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCNKAP51800 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 CIR1P1-201ENST00000524055 1133 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.89□□□□□ -1.63
CLCNKAP51800 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCNKAP51800 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCNKAP51800 MIR3934-201ENST00000579806 107 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC084373.1-201ENST00000603311 235 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC069431.2-201ENST00000604149 1099 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC025175.1-201ENST00000606482 759 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC063944.3-201ENST00000609969 533 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC087385.3-201ENST00000620477 187 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC093875.1-201ENST00000623688 504 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.89□□□□□ -1.63
CLCNKAP51800 CR381572.2-201ENST00000624852 397 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CLCNKAP51800 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCNKAP51800 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 AC092079.1-201ENST00000558620 1985 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 HSPD1P11-201ENST00000508643 1702 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 AL445437.1-201ENST00000623157 3087 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
CLCNKAP51800 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 ECM1P2-201ENST00000503354 1577 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.88□□□□□ -1.63
CLCNKAP51800 RNA5SP87-201ENST00000384155 118 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 HMGB3P19-201ENST00000403971 560 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 USP12PY-201ENST00000427677 1064 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 AC007559.1-201ENST00000428736 355 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 CYCSP11-201ENST00000436426 315 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLCNKAP51800 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCNKAP51800 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLCNKAP51800 RPS3AP53-201ENST00000454716 778 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC104164.3-201ENST00000467363 1258 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 AC021205.1-201ENST00000468797 348 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 SUMO2P5-201ENST00000506790 245 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.88□□□□□ -1.63
CLCNKAP51800 RNU6-1308P-201ENST00000516817 103 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC021006.3-201ENST00000530771 192 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 AC107918.3-201ENST00000533272 382 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC012557.1-201ENST00000607115 611 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC004948.1-201ENST00000609858 672 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 AC124016.2-201ENST00000610058 665 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCNKAP51800 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 ZNF652P1-201ENST00000442420 1309 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLCNKAP51800 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC073429.2-201ENST00000569694 1444 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCNKAP51800 AC093535.2-201ENST00000624769 2326 ntBASIC4.88□□□□□ -1.63
CLCNKAP51800 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 AC104118.1-201ENST00000607625 1589 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLCNKAP51800 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 IRF5P1-201ENST00000504852 2164 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CLCNKAP51800 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
CLCNKAP51800 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 UBBP2-201ENST00000376781 231 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms