RNA–Protein interactions for RNA: ENST00000548613.1

LINC02448-201, Transcript of long intergenic non-protein coding RNA 2448, humanhuman

TSL 2 BASIC

Gene LINC02448, Length 583 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02448-201ENST00000548613 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
LINC02448-201ENST00000548613 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
LINC02448-201ENST00000548613 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
LINC02448-201ENST00000548613 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
LINC02448-201ENST00000548613 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
LINC02448-201ENST00000548613 FOXD1Q16676 465 aa19.54■□□□□ 0.72
LINC02448-201ENST00000548613 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
LINC02448-201ENST00000548613 ADRA2BP18089 450 aa18.97■□□□□ 0.63
LINC02448-201ENST00000548613 PIAS4Q8N2W9 510 aaPredicted RBP18.43■□□□□ 0.54
LINC02448-201ENST00000548613 MSH5O43196 834 aa17.85■□□□□ 0.45
LINC02448-201ENST00000548613 PPP4R3CPQ6ZMV5 832 aa17.67■□□□□ 0.42
LINC02448-201ENST00000548613 KCNA4P22459 653 aa17.57■□□□□ 0.4
LINC02448-201ENST00000548613 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
LINC02448-201ENST00000548613 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
LINC02448-201ENST00000548613 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
LINC02448-201ENST00000548613 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
LINC02448-201ENST00000548613 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
LINC02448-201ENST00000548613 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
LINC02448-201ENST00000548613 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
LINC02448-201ENST00000548613 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
LINC02448-201ENST00000548613 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
LINC02448-201ENST00000548613 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
LINC02448-201ENST00000548613 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
LINC02448-201ENST00000548613 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
LINC02448-201ENST00000548613 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
LINC02448-201ENST00000548613 ZBTB22O15209 634 aa16.24■□□□□ 0.19
LINC02448-201ENST00000548613 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
LINC02448-201ENST00000548613 FOXD4L1Q9NU39 408 aa16.07■□□□□ 0.16
LINC02448-201ENST00000548613 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
LINC02448-201ENST00000548613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC02448-201ENST00000548613 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
LINC02448-201ENST00000548613 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
LINC02448-201ENST00000548613 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
LINC02448-201ENST00000548613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
LINC02448-201ENST00000548613 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
LINC02448-201ENST00000548613 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
LINC02448-201ENST00000548613 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
LINC02448-201ENST00000548613 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
LINC02448-201ENST00000548613 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
LINC02448-201ENST00000548613 APLP2Q06481 763 aa15.14■□□□□ 0.01
LINC02448-201ENST00000548613 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
LINC02448-201ENST00000548613 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
LINC02448-201ENST00000548613 CAPN15O75808 1086 aa14.93□□□□□ -0.02
LINC02448-201ENST00000548613 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
LINC02448-201ENST00000548613 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
LINC02448-201ENST00000548613 POLA2Q14181 598 aa14.77□□□□□ -0.05
LINC02448-201ENST00000548613 DSG3P32926 999 aa14.72□□□□□ -0.05
LINC02448-201ENST00000548613 ABCB7O75027 752 aa14.71□□□□□ -0.05
LINC02448-201ENST00000548613 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
LINC02448-201ENST00000548613 FKBP8Q14318 412 aa14.65□□□□□ -0.06
LINC02448-201ENST00000548613 FBLN2P98095 1184 aa14.54□□□□□ -0.08
LINC02448-201ENST00000548613 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.09
LINC02448-201ENST00000548613 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
LINC02448-201ENST00000548613 PROM2Q8N271 834 aa14.32□□□□□ -0.12
LINC02448-201ENST00000548613 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
LINC02448-201ENST00000548613 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
LINC02448-201ENST00000548613 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
LINC02448-201ENST00000548613 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
LINC02448-201ENST00000548613 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
LINC02448-201ENST00000548613 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
LINC02448-201ENST00000548613 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
LINC02448-201ENST00000548613 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC02448-201ENST00000548613 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
LINC02448-201ENST00000548613 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
LINC02448-201ENST00000548613 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
LINC02448-201ENST00000548613 RTN4Q9NQC3 1192 aaKnown RBP13.81□□□□□ -0.2
LINC02448-201ENST00000548613 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
LINC02448-201ENST00000548613 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
LINC02448-201ENST00000548613 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
LINC02448-201ENST00000548613 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
LINC02448-201ENST00000548613 SPDYE1Q8NFV5 336 aaPredicted RBP13.68□□□□□ -0.22
LINC02448-201ENST00000548613 PITPNM1O00562 1244 aa13.59□□□□□ -0.23
LINC02448-201ENST00000548613 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
LINC02448-201ENST00000548613 MIER1Q8N108 512 aa13.56□□□□□ -0.24
LINC02448-201ENST00000548613 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
LINC02448-201ENST00000548613 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
LINC02448-201ENST00000548613 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
LINC02448-201ENST00000548613 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
LINC02448-201ENST00000548613 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
LINC02448-201ENST00000548613 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
LINC02448-201ENST00000548613 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
LINC02448-201ENST00000548613 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
LINC02448-201ENST00000548613 PKD2Q13563 968 aa13.4□□□□□ -0.26
LINC02448-201ENST00000548613 NUBP1P53384 320 aa13.31□□□□□ -0.28
LINC02448-201ENST00000548613 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC02448-201ENST00000548613 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
LINC02448-201ENST00000548613 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
LINC02448-201ENST00000548613 PRKAR2AP13861 404 aaKnown RBP13.21□□□□□ -0.29
LINC02448-201ENST00000548613 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
LINC02448-201ENST00000548613 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
LINC02448-201ENST00000548613 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
LINC02448-201ENST00000548613 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
LINC02448-201ENST00000548613 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
LINC02448-201ENST00000548613 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC02448-201ENST00000548613 GSE1Q14687 1217 aa13.14□□□□□ -0.31
LINC02448-201ENST00000548613 RGL2O15211 777 aa13.11□□□□□ -0.31
LINC02448-201ENST00000548613 FAM212AQ96EL1 285 aa13.11□□□□□ -0.31
LINC02448-201ENST00000548613 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
LINC02448-201ENST00000548613 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
LINC02448-201ENST00000548613 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 260.7 ms