Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RETP07949 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.72□□□□□ -1.65
RETP07949 SULT1C2P2-201ENST00000562517 294 ntBASIC4.72□□□□□ -1.65
RETP07949 IPO5P1-202ENST00000600039 287 ntBASIC4.72□□□□□ -1.65
RETP07949 AL121932.1-201ENST00000605542 214 ntBASIC4.72□□□□□ -1.65
RETP07949 AC091979.2-201ENST00000607514 214 ntBASIC4.72□□□□□ -1.65
RETP07949 SNORD91B-202ENST00000608459 222 ntBASIC4.72□□□□□ -1.65
RETP07949 AL133243.1-201ENST00000614487 366 ntBASIC4.72□□□□□ -1.65
RETP07949 AL445567.2-201ENST00000618935 498 ntBASIC4.72□□□□□ -1.65
RETP07949 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.72□□□□□ -1.65
RETP07949 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.72□□□□□ -1.65
RETP07949 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RETP07949 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RETP07949 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RETP07949 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RETP07949 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RETP07949 NEAT1-202ENST00000501122 22743 ntBASIC4.72□□□□□ -1.65
RETP07949 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.72□□□□□ -1.65
RETP07949 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
RETP07949 AL133268.1-201ENST00000405676 1401 ntBASIC4.72□□□□□ -1.65
RETP07949 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RETP07949 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RETP07949 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
RETP07949 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RETP07949 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.71□□□□□ -1.66
RETP07949 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RETP07949 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
RETP07949 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RETP07949 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RETP07949 SNORA73.1-201ENST00000363107 205 ntBASIC4.71□□□□□ -1.66
RETP07949 RN7SKP280-201ENST00000364196 304 ntBASIC4.71□□□□□ -1.66
RETP07949 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.71□□□□□ -1.66
RETP07949 SNORA81-201ENST00000408493 178 ntBASIC4.71□□□□□ -1.66
RETP07949 IPMKP1-201ENST00000425988 855 ntBASIC4.71□□□□□ -1.66
RETP07949 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.71□□□□□ -1.66
RETP07949 AC000111.2-201ENST00000448200 210 ntBASIC4.71□□□□□ -1.66
RETP07949 AL691482.1-201ENST00000453255 87 ntBASIC4.71□□□□□ -1.66
RETP07949 HSPE1P22-201ENST00000456856 327 ntBASIC4.71□□□□□ -1.66
RETP07949 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.71□□□□□ -1.66
RETP07949 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.71□□□□□ -1.66
RETP07949 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.71□□□□□ -1.66
RETP07949 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.71□□□□□ -1.66
RETP07949 MTCYBP19-201ENST00000517463 1124 ntBASIC4.71□□□□□ -1.66
RETP07949 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.71□□□□□ -1.66
RETP07949 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.71□□□□□ -1.66
RETP07949 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.71□□□□□ -1.66
RETP07949 MIR5699-201ENST00000578903 90 ntBASIC4.71□□□□□ -1.66
RETP07949 AL133338.2-201ENST00000604292 736 ntBASIC4.71□□□□□ -1.66
RETP07949 AC012409.3-201ENST00000611343 981 ntBASIC4.71□□□□□ -1.66
RETP07949 AL158196.1-201ENST00000616786 434 ntBASIC4.71□□□□□ -1.66
RETP07949 AP003072.5-201ENST00000623872 773 ntBASIC4.71□□□□□ -1.66
RETP07949 AC067931.1-201ENST00000624190 671 ntBASIC4.71□□□□□ -1.66
RETP07949 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.71□□□□□ -1.66
RETP07949 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RETP07949 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RETP07949 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.71□□□□□ -1.66
RETP07949 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RETP07949 AC090971.4-201ENST00000560291 1800 ntBASIC4.71□□□□□ -1.66
RETP07949 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.71□□□□□ -1.66
RETP07949 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RETP07949 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.7□□□□□ -1.66
RETP07949 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
RETP07949 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RETP07949 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 AC008549.2-201ENST00000333482 706 ntBASIC4.7□□□□□ -1.66
RETP07949 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RETP07949 SNORA71.2-201ENST00000364941 134 ntBASIC4.7□□□□□ -1.66
RETP07949 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 RNU6-167P-201ENST00000384292 106 ntBASIC4.7□□□□□ -1.66
RETP07949 HSPD1P16-201ENST00000402302 394 ntBASIC4.7□□□□□ -1.66
RETP07949 NCSTNP1-201ENST00000406229 144 ntBASIC4.7□□□□□ -1.66
RETP07949 QRSL1P2-201ENST00000418582 964 ntBASIC4.7□□□□□ -1.66
RETP07949 AC140479.3-201ENST00000418944 1126 ntBASIC4.7□□□□□ -1.66
RETP07949 LINC00993-201ENST00000420453 540 ntBASIC4.7□□□□□ -1.66
RETP07949 AC013268.2-201ENST00000420753 337 ntBASIC4.7□□□□□ -1.66
RETP07949 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 EIF4HP2-201ENST00000424380 563 ntBASIC4.7□□□□□ -1.66
RETP07949 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.7□□□□□ -1.66
RETP07949 VN1R96P-201ENST00000446052 858 ntBASIC4.7□□□□□ -1.66
RETP07949 AC073587.1-201ENST00000447093 876 ntBASIC4.7□□□□□ -1.66
RETP07949 AC108751.2-201ENST00000469993 231 ntBASIC4.7□□□□□ -1.66
RETP07949 AC091868.1-201ENST00000508746 304 ntBASIC4.7□□□□□ -1.66
RETP07949 PGBD4P4-201ENST00000509673 613 ntBASIC4.7□□□□□ -1.66
RETP07949 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.7□□□□□ -1.66
RETP07949 MTCO1P49-201ENST00000523429 802 ntBASIC4.7□□□□□ -1.66
RETP07949 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.7□□□□□ -1.66
RETP07949 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 AC025884.1-201ENST00000556034 378 ntBASIC4.7□□□□□ -1.66
RETP07949 AC011270.1-201ENST00000558606 583 ntBASIC4.7□□□□□ -1.66
RETP07949 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.7□□□□□ -1.66
RETP07949 AC006130.2-201ENST00000586202 326 ntBASIC4.7□□□□□ -1.66
RETP07949 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.7□□□□□ -1.66
RETP07949 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.7□□□□□ -1.66
RETP07949 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.7□□□□□ -1.66
RETP07949 AL161912.3-201ENST00000605404 628 ntBASIC4.7□□□□□ -1.66
RETP07949 AC015849.6-201ENST00000605454 474 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms