Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 AP000357.1-201ENST00000409926 1165 ntBASIC4.11□□□□□ -1.75
CHD8Q9HCK8 AL831737.1-201ENST00000441288 271 ntBASIC4.11□□□□□ -1.75
CHD8Q9HCK8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 RN7SL271P-201ENST00000487601 295 ntBASIC4.11□□□□□ -1.75
CHD8Q9HCK8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 E2F6P2-201ENST00000420708 748 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 WBP1LP4-201ENST00000505043 344 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 HSPE1P5-201ENST00000561489 272 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC020634.1-201ENST00000608701 549 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 uc_338.13-201ENST00000618243 179 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 LINC00622-201ENST00000562811 1570 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 RIOK3P1-201ENST00000418778 1528 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 RNA5SP223-201ENST00000365174 120 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC017019.1-201ENST00000426129 261 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 RN7SL517P-201ENST00000462240 305 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 OR8I1P-201ENST00000529291 931 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC006065.6-201ENST00000625201 545 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC011503.2-201ENST00000594230 1500 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 AC027290.2-201ENST00000623210 18662 ntBASIC4.1□□□□□ -1.75
CHD8Q9HCK8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.1□□□□□ -1.75
CHD8Q9HCK8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AP000580.1-201ENST00000404439 358 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 HMGN1P15-201ENST00000513870 295 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 ATP5F1P5-201ENST00000526403 760 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 OR2AS2P-201ENST00000606902 342 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 MIR7151-201ENST00000617477 60 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AC005261.2-201ENST00000593427 4258 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 RAD17P2-201ENST00000451754 1977 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 FTLP6-201ENST00000355274 422 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AL121890.1-201ENST00000435457 205 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 OR9M1P-201ENST00000459641 921 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 AC016957.2-201ENST00000616998 848 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 LINC01808-202ENST00000641680 1116 ntBASIC4.09□□□□□ -1.75
CHD8Q9HCK8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.09□□□□□ -1.75
CHD8Q9HCK8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CHD8Q9HCK8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms